AT1G79820.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:golgi 1.000 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : Major facilitator superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
SUPPRESSOR OF G PROTEIN BETA1 (SGB1); FUNCTIONS IN: carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity; INVOLVED IN: transport, transmembrane transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Sugar transporter, conserved site (InterPro:IPR005829), Major facilitator superfamily (InterPro:IPR020846), Sugar/inositol transporter (InterPro:IPR003663), General substrate transporter (InterPro:IPR005828), Major facilitator superfamily, general substrate transporter (InterPro:IPR016196); BEST Arabidopsis thaliana protein match is: Major facilitator superfamily protein (TAIR:AT1G67300.1); Has 34820 Blast hits to 34269 proteins in 2224 species: Archae - 604; Bacteria - 18622; Metazoa - 4518; Fungi - 6808; Plants - 2676; Viruses - 2; Other Eukaryotes - 1590 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr1:-:30022581..30026771 | ||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 52443.80 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 8.97 | ||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | 0.65 | ||||||||||||||||||||||||||||||||||||||||||||||||
Length | 495 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MDSVRRTYTI MRGRHIDKRV PSKEFLSALD KAETAVRLPT GTGKDCGNPS WKRSLPHVLV ASLTSLLFGY HLGVVNETLE SISIDLGFSG NTIAEGLVVS 101: TCLGGAFIGS LFSGLVADGV GRRRAFQLSA LPMIVGASVS ASTESLMGML LGRFLVGIGM GIGPSVTALY VTEVSPAYVR GTYGSSTQIA TCIGLLGSLF 201: AGIPAKDNLG WWRICFWIST VPAAMLAVFM ELCVESPQWL FKRGRAAEAE AVFEKLLGGS YVKAAMAELV KSDRGDDADS AKLSELLFGR SFRVVFIGST 301: LFALQQLSGI NAVFYFSSTV FKKAGVPSAS ANICVGVCNL LGSTVAVVLM DKLGRKVLLI GSFAGMAVSL GLQAIAYTSL PSPFGTLFLS VGGMLLFVLS 401: FATGAGPVPS LLLSEICPGR LRATALAVCL AVHWVINFFV GLLFLRMLEQ LGSVLLNAIF GFFCVVAVIF VQKNVVETKG KSLQEIEISL LSSTQ |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)