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AT1G14970.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.800
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : O-fucosyltransferase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
O-fucosyltransferase family protein; CONTAINS InterPro DOMAIN/s: GDP-fucose protein O-fucosyltransferase (InterPro:IPR019378); BEST Arabidopsis thaliana protein match is: O-fucosyltransferase family protein (TAIR:AT2G01480.1); Has 831 Blast hits to 817 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 831; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IJW8eggNOG:ENOG410XT6ZEMBL:CP002684EnsemblPlants:AT1G14970
EnsemblPlants:AT1G14970.1entrez:838062GeneID:838062GO:GO:0016021
GO:GO:0016757Gramene:AT1G14970.1hmmpanther:PTHR31288hmmpanther:PTHR31288:SF10
InParanoid:F4HXW9InterPro:IPR019378InterPro:IPR024709iPTMnet:F4HXW9
KEGG:00514+2.4.1.221KEGG:ath:AT1G14970OMA:YISCMLFPaxDb:F4HXW9
Pfam:PF10250PIRSF:PIRSF009360PRIDE:F4HXW9ProteinModelPortal:F4HXW9
Proteomes:UP000006548RefSeq:NP_172950.1TAIR:AT1G14970TMHMM:TMhelix
UniGene:At.41947unipathway:UPA00378UniProt:F4HXW9
Coordinates (TAIR10) chr1:-:5162085..5164917
Molecular Weight (calculated) 63411.50 Da
IEP (calculated) 9.93
GRAVY (calculated) -0.27
Length 562 amino acids
Sequence (TAIR10)
(BLAST)
001: MISQVERDLS IQNRLPGSDH TTPSPPTSPH LCRSRSKSSS VSGQQQSRNV AHRLSWIILS VLLRRQGILL FAPIIYISCM LFHLHAASFD ASPIIHRRPA
101: PGSVYRSPQV YARLRGEIEA DNTTADAIST IWKRSYKGVE WKPCVNMSTG VLPVSNGFIF IEANGGLNQQ RTSICNAVAV AGYLNATLVI PNFHYHSIWK
201: DPSKFGDIYD EEYFIDTLAN DVRVVDTVPE YLMERFDYNL TNVYNFRVKA WAPTSYYRDS VLPKLLEEKV IRISPFANRL SFDAPRAVQR FRCLANNVAL
301: RFSKPILTQG ETLVNKMKGL SANNAGKYVS VHLRFEEDMV AFSCCVFDGG DQEKQDMIAA RERGWKGKFT KPGRVIRPGA NRLNGKCPLT PLEVGLMLRG
401: MGFNKSTYIF LAAGPIYSAN RTMAPLLEMF PNLQTKEMLA SEEDLAPFKN FSSRMAAIDY TVCLHSEVFV TTQGGNFPHF LMGHRRYLFG GHSKTIQPDK
501: RKLAVLFDNP KLGWKSFKRQ MLSMRSHSDS KGFELKRSSD SIYIFPCPDC MCRKNKTTAS AT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)