AT4G21534.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.508 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Diacylglycerol kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Diacylglycerol kinase family protein; FUNCTIONS IN: diacylglycerol kinase activity; INVOLVED IN: activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway; CONTAINS InterPro DOMAIN/s: Diacylglycerol kinase, catalytic domain (InterPro:IPR001206); BEST Arabidopsis thaliana protein match is: sphingosine kinase 1 (TAIR:AT4G21540.1). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:11456230..11458820 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 53893.40 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.60 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.07 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 481 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MENDQFMCPT DIITGIVFID GELAMLTLTA DGELRWTEYG LRQYLSMKKD VLGFIVEGKQ IRVKAVVEKE AGGICCGQFG GDFVRKDFVF EPLIDQNGWC 101: YKLRQYLDSL GRPKRLLVFV NPFGGKKSAR EIFVKEVKPL FEDADVQLEI QETKYQLHAK EFVKSMDVSK YDGIVCVSGD GILVEVVNGL LERADWRNAL 201: KLPIGMVPAG TGNGMIKSLL DTVGLRCCAN SATISIIRGH KRSVDVATIA QGNTKFFSVL MLAWGLIADI DIESEKFRWM GSARIDFYAL QRIICLRRYN 301: GRILFLPAPG FEGYGQPASC SLYQEPHVSD KEVGYQGPET KFEDLEWREM KGPFVTIWLH NVPWGSENTL TAPAAKFSDG YLDLIVLKNC PKLVLLSLMR 401: QTSSGTHVES PYIVYIKVKA FVLEPGALVD EPDKEGIIDS DGEVLARGKR TYKCDQKALM SYDKLQVTVD QGLATLFSPE Y |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)