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AT4G21020.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Late embryogenesis abundant protein (LEA) family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Late embryogenesis abundant protein (LEA) family protein; BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant protein (LEA) family protein (TAIR:AT5G44310.2); Has 25029 Blast hits to 12516 proteins in 1815 species: Archae - 109; Bacteria - 7990; Metazoa - 4935; Fungi - 1662; Plants - 2602; Viruses - 153; Other Eukaryotes - 7578 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410INKUeggNOG:ENOG410Z539EMBL:AL080282EMBL:AL161554
EMBL:AY072166EMBL:AY117321EMBL:CP002687EnsemblPlants:AT4G21020
EnsemblPlants:AT4G21020.1entrez:827849GeneID:827849GO:GO:0005739
GO:GO:0009536Gramene:AT4G21020.1hmmpanther:PTHR23241hmmpanther:PTHR23241:SF65
HOGENOM:HOG000090577KEGG:ath:AT4G21020ncoils:CoilOMA:KKWREDT
PhylomeDB:Q9SUB2PIR:T10644Proteomes:UP000006548RefSeq:NP_193834.1
STRING:3702.AT4G21020.1SUPFAM:0053393TAIR:AT4G21020UniGene:At.32674
UniProt:Q9SUB2
Coordinates (TAIR10) chr4:+:11228263..11229392
Molecular Weight (calculated) 29423.80 Da
IEP (calculated) 8.31
GRAVY (calculated) -1.29
Length 266 amino acids
Sequence (TAIR10)
(BLAST)
001: MAAMQLTRTA LVGLSKAFPG IKAPATLAAS SRKVSRICFA TSVSQNEGRD PLDNARDSRA DSAYGSKKWR EDTGEYYAQA AKDKANEGAS KAADKAYETK
101: EQAKDKAYET KEKAKDTAYN AKEKAKDYAE RTKDKVNEGA YKAADKAEDT KEKAKDYAED TMDNAKEKAR HAKEKVKEYG EDTKEKAEGF KETVKGKAEE
201: LGEKTKETVK GAWESTKNAA QTVTEAVVGP EEDAEKARAD MNKGVEDHRK KKAEKDQKED DFITFN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)