AT4G21020.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Late embryogenesis abundant protein (LEA) family protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Late embryogenesis abundant protein (LEA) family protein; BEST Arabidopsis thaliana protein match is: Late embryogenesis abundant protein (LEA) family protein (TAIR:AT5G44310.2); Has 25029 Blast hits to 12516 proteins in 1815 species: Archae - 109; Bacteria - 7990; Metazoa - 4935; Fungi - 1662; Plants - 2602; Viruses - 153; Other Eukaryotes - 7578 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:11228263..11229392 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 29423.80 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.31 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -1.29 | ||||||||||||||||||||||||||||||||
| Length | 266 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAAMQLTRTA LVGLSKAFPG IKAPATLAAS SRKVSRICFA TSVSQNEGRD PLDNARDSRA DSAYGSKKWR EDTGEYYAQA AKDKANEGAS KAADKAYETK 101: EQAKDKAYET KEKAKDTAYN AKEKAKDYAE RTKDKVNEGA YKAADKAEDT KEKAKDYAED TMDNAKEKAR HAKEKVKEYG EDTKEKAEGF KETVKGKAEE 201: LGEKTKETVK GAWESTKNAA QTVTEAVVGP EEDAEKARAD MNKGVEDHRK KKAEKDQKED DFITFN |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)