AT4G18220.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.855 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Drug/metabolite transporter superfamily protein | ||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Drug/metabolite transporter superfamily protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: purine permease 10 (TAIR:AT4G18210.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:10078768..10080109 | ||||||||
| Molecular Weight (calculated) | 37821.40 Da | ||||||||
| IEP (calculated) | 8.63 | ||||||||
| GRAVY (calculated) | 0.44 | ||||||||
| Length | 344 amino acids | ||||||||
| Sequence (TAIR10) (BLAST) |
001: MKGDQEVQVI GQSVATILGR LYYENGGNSK WLATVVQLVG FPILLPYHLL SVKTHTTTQR DGKLTSLRNR ALVYIVLGLL VGAACYLYSI GLLYLPVSTL 101: SLICASQLAF TAFFSYLLNS QKLTPIILNS LFLLTISSTL LAFNNEESDS KKVTKGEYVK GFVCTVGASA GFGLLLSLQQ LAFRKVLKKQ TFSEVINMII 201: YMSLVASCVS VVGLFASSEW KTLSSEMENY KLGKVSYVMN LVWTAVTWQV FSIGCTGLIF ELSSLFSNAI SALGLPVVPI LAVIIFHDKM NGLKVISMIL 301: AIWGFVSYVY QQYLDETNLK KSNEIPTTES PDRPEAEGSS EQSK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)