AT4G17370.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Oxidoreductase family protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Oxidoreductase family protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Oxidoreductase, N-terminal (InterPro:IPR000683), Oxidoreductase, C-terminal (InterPro:IPR004104), NAD(P)-binding domain (InterPro:IPR016040); Has 13319 Blast hits to 13319 proteins in 1855 species: Archae - 262; Bacteria - 9244; Metazoa - 179; Fungi - 353; Plants - 43; Viruses - 0; Other Eukaryotes - 3238 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:+:9706188..9708142 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 40737.60 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.08 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.00 | ||||||||||||||||||||||||||||||||
| Length | 368 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MADVKDSVIT KYGIVGIGMM GREHLINLHH LRDQGLAVVC IADPHPPSQL LAIELAQSFG WELKVFSGHE ELLKSELCDV IVVSSPNMTH HQILMDIINY 101: SKPHHVLVEK PLCTTVADCK QVLEAAKKRS DMVVQVGLEY RYMPPVAKLI EQVKGRDFGN VKMVAIREHR FPFLVKVNNW NRFNVNTGGT LVEKCCHFFD 201: LMRLFAGANP VCVMASGGMD VNHKDEVYGG KVPDIIDNAY VIIEFDNGCR GMLDLCMFAE GSKNEQEISV TGDIGKGEAL VPEGIVRSGS RIGGREHVQT 301: IKAEDERIKY EGLHHGSSYL EHLTFLSAIR GEGIAAVDLE DGLMAVAMGV AAQLSIQERR YVTIDEVL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)