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AT1G16460.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 1.000
ASURE: cytosol
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : rhodanese homologue 2
Curator
Summary (TAIR10)
encodes a cytoplasmic thiosulfate:cyanide sulfurtransferase, activity of which increased the rhodanese activity of transgenic yeast. Can also act as a mercaptopyruvate sulfurtransferase.
Computational
Description (TAIR10)
rhodanese homologue 2 (RDH2); FUNCTIONS IN: 3-mercaptopyruvate sulfurtransferase activity, thiosulfate sulfurtransferase activity; INVOLVED IN: sulfate transport, aging; LOCATED IN: cytosol, cytoplasm; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Rhodanese-like (InterPro:IPR001763), Thiosulphate sulfurtransferase, conserved site (InterPro:IPR001307); BEST Arabidopsis thaliana protein match is: mercaptopyruvate sulfurtransferase 1 (TAIR:AT1G79230.1); Has 6167 Blast hits to 6142 proteins in 1437 species: Archae - 162; Bacteria - 3582; Metazoa - 248; Fungi - 148; Plants - 95; Viruses - 0; Other Eukaryotes - 1932 (source: NCBI BLink).
Protein Annotations
eggNOG:COG2897eggNOG:KOG1529EMBL:F19994EnsemblPlants:AT1G16460
EnsemblPlants:AT1G16460.1entrez:838216ExpressionAtlas:Q43289Gene3D:3.40.250.10
GO:GO:0004792gramene_pathway:2.8.1.1gramene_pathway:PWY-5350gramene_plant_reactome:1119581
gramene_plant_reactome:6875277hmmpanther:PTHR11364hmmpanther:PTHR11364:SF13InterPro:IPR001307
InterPro:IPR001763KEGG:00920+2.8.1.1PaxDb:Q43289Pfam:PF00581
Pfscan:PS50206PROSITE:PS00380ProteinModelPortal:Q43289scanprosite:PS00380
scanprosite:PS00683STRING:3702.AT1G16460.2SUPFAM:SSF52821tair10-symbols:ATMST2
tair10-symbols:ATRDH2tair10-symbols:MST2tair10-symbols:RDH2tair10-symbols:ST2
tair10-symbols:STR2UniProt:Q43289
Coordinates (TAIR10) chr1:-:5619848..5621981
Molecular Weight (calculated) 34719.00 Da
IEP (calculated) 4.91
GRAVY (calculated) -0.15
Length 318 amino acids
Sequence (TAIR10)
(BLAST)
001: MASSGSEAKA NYAPISTNEP VVSVDWLHSN LGDADIKVLD ASWYMAHEQR NPIQEYQVAH IPGALFFDLN GIADRKTNLR HMLPSEEAFA AGCSALGIEN
101: NDGVVVYDGM GLFSAARVWW MFRVFGHDKV WVLDGGLPKW RASGYDVESS VSNDAILKAS AATEAIEKIY QGQTISPITF QTKFRPHLVL ALDQVKENIE
201: DKTYQHIDAR SKARFDGIAP EPWKGLPSGH IPGSKCVPFP LMFDSSQTLL PAEELKKQFE QEDISLDSPI AASCGTGVTA CILALGLYRL GKTNVAIYDG
301: SWTEWATAPN LPIVGSSS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)