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AT4G17150.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
plasma membrane 0.957
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : alpha/beta-Hydrolases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
alpha/beta-Hydrolases superfamily protein; BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT4G14290.1); Has 2710 Blast hits to 2708 proteins in 908 species: Archae - 16; Bacteria - 1896; Metazoa - 181; Fungi - 45; Plants - 202; Viruses - 0; Other Eukaryotes - 370 (source: NCBI BLink).
Protein Annotations
eggNOG:COG1073eggNOG:KOG1552EMBL:AK118855EMBL:CP002687
EnsemblPlants:AT4G17150EnsemblPlants:AT4G17150.1entrez:827425ESTHER:arath-AT4G17150
ExpressionAtlas:Q8GWG9Gene3D:3.40.50.1820GeneID:827425GO:GO:0016787
Gramene:AT4G17150.1hmmpanther:PTHR12277hmmpanther:PTHR12277:SF58HOGENOM:HOG000030425
InterPro:IPR022742InterPro:IPR029058MEROPS:S09.A29OMA:FGHAKDD
Pfam:PF12146Pfam:PF12695PhylomeDB:Q8GWG9Proteomes:UP000006548
RefSeq:NP_193448.2SMR:Q8GWG9SUPFAM:SSF53474TAIR:AT4G17150
UniGene:At.33019UniProt:Q8GWG9
Coordinates (TAIR10) chr4:+:9638591..9641648
Molecular Weight (calculated) 56418.50 Da
IEP (calculated) 5.80
GRAVY (calculated) -0.52
Length 502 amino acids
Sequence (TAIR10)
(BLAST)
001: MSSLVLGIKM IDQFINFVIR PPRAEYDPDQ YLWEKEFSLG GTKCKRQDLE LTNSRGHTLR CSHYVPSSSR EDTPLPCVIY CHGNSGCRAD ANEAVMVLLP
101: SNITVFTLDF SGSGLSEGDY VSLGWHEKDD LKTVVSYLRN SNQVSRIGLW GRSMGAVTSL LYGAEDPSIA GMVLDSAFSN LFDLMMELVD VYKIRLPKFT
201: VKVAVQYMRR IIQKKAKFNI MDLNCVKVSP KTFIPALFGH ASGDKFIQPH HSDLILKCYA GDKNIIKFDG DHNSSRPQSY YDSVLVFFYN VLRPPPISSS
301: YSSKLESYYS LGDVNSATGL DESFLYEIIS GLRSACIDVA SSSSAPPAPL TTKPTNELLS EAMPMIDTDT VLVEDNDHNV DDPENFEGKR IDQFEEGCSF
401: TSSNRESWGR CSSLGGTEED ESLTAGEGDQ VEKTADVNTE RKPRDSSREE EEEDSKEKKI KNGGETDAKK PRHEKLERLE AFSKRLRHYI LKRVNHRRHR
501: SP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)