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AT4G12310.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
vacuole 0.834
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:25641898 (2015): plasma membrane
  • PMID:21988472 (2012): plant-type vacuole plant-type vacuole membrane
  • PMID:19334764 (2009): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cytochrome P450, family 706, subfamily A, polypeptide 5
Curator
Summary (TAIR10)
member of CYP706A
Computational
Description (TAIR10)
cytochrome P450, family 706, subfamily A, polypeptide 5 (CYP706A5); FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; INVOLVED IN: oxidation reduction; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group I (InterPro:IPR002401), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 706, subfamily A, polypeptide 6 (TAIR:AT4G12320.1); Has 33607 Blast hits to 33314 proteins in 1696 species: Archae - 58; Bacteria - 3550; Metazoa - 11926; Fungi - 7339; Plants - 9547; Viruses - 3; Other Eukaryotes - 1184 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G12310-MONOMEReggNOG:COG2124eggNOG:KOG0156EMBL:AK226704
EMBL:AL080318EMBL:AL161533EMBL:BT012289EMBL:CP002687
EnsemblPlants:AT4G12310EnsemblPlants:AT4G12310.1entrez:826840Gene3D:1.10.630.10
GeneID:826840GO:GO:0005506GO:GO:0016020GO:GO:0016021
GO:GO:0016709GO:GO:0020037GO:GO:0044550Gramene:AT4G12310.1
hmmpanther:PTHR24298hmmpanther:PTHR24298:SF114HOGENOM:HOG000218628InterPro:IPR001128
InterPro:IPR002401InterPro:IPR017972KEGG:ath:AT4G12310ncoils:Coil
Pfam:PF00067PhylomeDB:Q9STI0PIR:T48141PRINTS:PR00385
PRINTS:PR00463PROSITE:PS00086Proteomes:UP000006548RefSeq:NP_192968.3
scanprosite:PS00086SMR:Q9STI0STRING:3702.AT4G12310.1SUPFAM:SSF48264
TAIR:AT4G12310tair10-symbols:CYP706A5TMHMM:TMhelixUniGene:At.27540
UniProt:Q9STI0
Coordinates (TAIR10) chr4:-:7310598..7312522
Molecular Weight (calculated) 59049.00 Da
IEP (calculated) 6.68
GRAVY (calculated) -0.07
Length 520 amino acids
Sequence (TAIR10)
(BLAST)
001: MSMLSNLFPD NAISLTPYAY AVLILTATFS ILWYIFKRSP QPPLPPGPRG LPIVGNLPFL DPDLHTYFTK LAQSHGPIFK LNLGSKLTVV VNSPSLASEI
101: LKDQDINFSN HDVPLTARAV TYGGLDLVWL PYGAEWRMLR KVCAAKLFSR KTLDSFYELR RKEIRERTRC LYQKGLEKSP VNVGEQLFLT MMNLMMNMLW
201: GGSVKAEDME SVGTEFKGVI SEITRLLGVP NVSDFFPMLA RFDLQGLVKK MHLYARDLDA ILDRAIEQMQ RLRSRDGDDG ECKDFLQHLM KLRDQEADSD
301: VPITMNHVKA VLMDMVVGGT ESSTNTIEFV MAELISNPEL MRRAQQELDE VVGKDNIVEE SHITSLPYIL AVLKETLRLY PTIPLLVPHR PSETALVGGY
401: TIPKNTKIFI NVWSIQRDPN VWEYPTEFRP ERFLDKKSCD FTGTDYSYLP FGSGRRICAG IALAERMILY TLATLLHSFD WTIPDGHVLD LEEKFGIVLK
501: LKTPLVALPI PRLSNSNFYF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)