AT4G11630.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:mitochondrion 1.000 ASURE: mitochondrion What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : Ribosomal protein L19 family protein | ||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
Ribosomal protein L19 family protein; FUNCTIONS IN: structural constituent of ribosome; INVOLVED IN: translation, ribosome biogenesis; LOCATED IN: ribosome, intracellular; CONTAINS InterPro DOMAIN/s: Ribosomal protein L19 (InterPro:IPR001857); BEST Arabidopsis thaliana protein match is: Ribosomal protein L19 family protein (TAIR:AT5G11750.1); Has 7944 Blast hits to 7944 proteins in 2668 species: Archae - 0; Bacteria - 5364; Metazoa - 112; Fungi - 56; Plants - 151; Viruses - 0; Other Eukaryotes - 2261 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr4:+:7019793..7021068 | ||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 25415.80 Da | ||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 11.05 | ||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.45 | ||||||||||||||||||||||||||||||||||||||||
Length | 225 amino acids | ||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MQSIRGSTRL LQRHRFSISN TLRFTSSSSC GSWSENESRK LGFDSCPSSR AATYLISSLK NAGFSSSAIP KQNFTYASRC FSTTGDSSVQ GSPESDCVVP 101: QRIKFKRLDK TAKHIMQIVD KEAVEEVRSL REIPEIKPGY IVQLKVEVPE NKRRVSIVKG VVIARRNAGL NSTFRIRRLV AGVGVESMFP LYSPNLREIK 201: VVDKKKVRRA KLYYLRDKVN ALKKH |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)