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AT4G11320.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 0.992
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Papain family cysteine protease
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Papain family cysteine protease; FUNCTIONS IN: cysteine-type endopeptidase activity, cysteine-type peptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Proteinase inhibitor I29, cathepsin propeptide (InterPro:IPR013201), Peptidase C1A, papain (InterPro:IPR013128), Peptidase C1A, papain C-terminal (InterPro:IPR000668), Peptidase, cysteine peptidase active site (InterPro:IPR000169); BEST Arabidopsis thaliana protein match is: Papain family cysteine protease (TAIR:AT4G11310.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G11320-MONOMEREC:3.4.22.-eggNOG:COG4870eggNOG:KOG1543
EMBL:AL096882EMBL:AL161531EMBL:AY035055EMBL:AY051062
EMBL:CP002687EnsemblPlants:AT4G11320EnsemblPlants:AT4G11320.1entrez:826734
GeneID:826734Genevisible:Q9SUS9GO:GO:0004197GO:GO:0005615
GO:GO:0005764GO:GO:0051603Gramene:AT4G11320.1hmmpanther:PTHR12411
hmmpanther:PTHR12411:SF345HOGENOM:HOG000230773InParanoid:Q9SUS9InterPro:IPR000668
InterPro:IPR013128InterPro:IPR013201InterPro:IPR025660KEGG:ath:AT4G11320
merops:C01.A21MEROPS:I29.003OMA:KATDQKCPANTHER:PTHR12411
PaxDb:Q9SUS9Pfam:PF00112Pfam:PF08246Pfam:Q9SUS9
Pfscan:PS51257PhylomeDB:Q9SUS9PIR:T13023PRIDE:Q9SUS9
PRINTS:PR00705PRO:PR:Q9SUS9PROSITE:PS00639ProteinModelPortal:Q9SUS9
Proteomes:UP000006548RefSeq:NP_567377.1scanprosite:PS00639SMART:SM00645
SMART:SM00848SMR:Q9SUS9STRING:3702.AT4G11320.1SUPFAM:SSF54001
TAIR:AT4G11320TMHMM:TMhelixUniGene:At.25206UniProt:Q9SUS9
Coordinates (TAIR10) chr4:+:6887336..6888827
Molecular Weight (calculated) 40713.00 Da
IEP (calculated) 5.66
GRAVY (calculated) -0.35
Length 371 amino acids
Sequence (TAIR10)
(BLAST)
001: MGYAKSAMLI FLLALVIASC ATAMDMSVVS SNDNHHVTAG PGRRQGIFDA EATLMFESWM VKHGKVYDSV AEKERRLTIF EDNLRFITNR NAENLSYRLG
101: LNRFADLSLH EYGEICHGAD PRPPRNHVFM TSSNRYKTSD GDVLPKSVDW RNEGAVTEVK DQGLCRSCWA FSTVGAVEGL NKIVTGELVT LSEQDLINCN
201: KENNGCGGGK VETAYEFIMN NGGLGTDNDY PYKALNGVCE GRLKEDNKNV MIDGYENLPA NDEAALMKAV AHQPVTAVVD SSSREFQLYE SGVFDGTCGT
301: NLNHGVVVVG YGTENGRDYW IVKNSRGDTW GEAGYMKMAR NIANPRGLCG IAMRASYPLK NSFSTDKVSV A
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)