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AT4G10620.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : P-loop containing nucleoside triphosphate hydrolases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
P-loop containing nucleoside triphosphate hydrolases superfamily protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G57180.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-2476-MONOMEReggNOG:COG1161eggNOG:KOG1249EMBL:AF118222
EMBL:AY050983EMBL:AY113987EMBL:CP002687EnsemblPlants:AT4G10620
EnsemblPlants:AT4G10620.1entrez:826654Gene3D:3.40.50.300GeneID:826654
GO:GO:0005525Gramene:AT4G10620.1hmmpanther:PTHR11089hmmpanther:PTHR11089:SF38
InterPro:IPR006073InterPro:IPR027417KEGG:ath:AT4G10620OMA:FDHTVGR
Pfam:PF01926PhylomeDB:Q9ZSB8Proteomes:UP000006548RefSeq:NP_567364.1
SMR:Q9ZSB8STRING:3702.AT4G10620.1SUPFAM:SSF52540TAIR:AT4G10620
UniGene:At.3014UniProt:Q9ZSB8
Coordinates (TAIR10) chr4:+:6564297..6566402
Molecular Weight (calculated) 66494.40 Da
IEP (calculated) 9.83
GRAVY (calculated) -0.42
Length 597 amino acids
Sequence (TAIR10)
(BLAST)
001: MLSKAARELS SSKLKPLFAL HLSSFKSSIP TKPNPSPPSY LNPHHFNNIS KPPFLRFYSS SSSSNLLPLN RDGNYNDTTS ITISVCPGCG VHMQNSNPKH
101: PGFFIKPSTE KQRNDLNLRD LTPISQEPEF IDSIKRGFII EPISSSDLNP RDDEPSDSRP LVCARCHSLR HYGRVKDPTV ENLLPDFDFD HTVGRRLGSA
201: SGARTVVLMV VDASDFDGSF PKRVAKLVSR TIDENNMAWK EGKSGNVPRV VVVVTKIDLL PSSLSPNRFE QWVRLRAREG GLSKITKLHF VSPVKNWGIK
301: DLVEDVAAMA GKRGHVWAVG SQNAGKSTLI NAVGKVVGGK VWHLTEAPVP GTTLGIIRIE GVLPFEAKLF DTPGLLNPHQ ITTRLTREEQ RLVHISKELK
401: PRTYRIKEGY TVHIGGLMRL DIDEASVDSL YVTVWASPYV PLHMGKKENA YKTLEDHFGC RLQPPIGEKR VEELGKWVRK EFRVSGTSWD TSSVDIAVSG
501: LGWFALGLKG DAILGVWTHE GIDVFCRDSL LPQRAHTFED SGFTVSKIVA KADRNFNQIH KEETQKKRKP NKSFSDSVSD RDNSREVSQP SDILPTM
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)