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AT4G08700.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
ASURE: plasma membrane
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Drug/metabolite transporter superfamily protein
Curator
Summary (TAIR10)
Member of a family of proteins related to PUP1, a purine transporter. May be involved in the transport of purine and purine derivatives such as cytokinins, across the plasma membrane.
Computational
Description (TAIR10)
ATPUP13; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF250 (InterPro:IPR004853); BEST Arabidopsis thaliana protein match is: purine permease 12 (TAIR:AT5G41160.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioGrid:11737eggNOG:ENOG410JU4PeggNOG:ENOG411077NEMBL:AL161512
EMBL:AL161813EMBL:AY074535EMBL:AY087844EMBL:AY096468
EMBL:CP002687EnsemblPlants:AT4G08700EnsemblPlants:AT4G08700.1entrez:826438
GeneID:826438Genevisible:Q8RY83GO:GO:0005345GO:GO:0006863
GO:GO:0016020GO:GO:0016021GO:GO:1904823Gramene:AT4G08700.1
hmmpanther:PTHR31376hmmpanther:PTHR31376:SF2HOGENOM:HOG000238172InParanoid:Q8RY83
InterPro:IPR030182KEGG:ath:AT4G08700ncoils:CoilOMA:CSFKTLV
PANTHER:PTHR31376PaxDb:Q8RY83Pfam:PF16913Pfam:Q8RY83
PhylomeDB:Q8RY83PIR:C85087PRO:PR:Q8RY83ProteinModelPortal:Q8RY83
Proteomes:UP000006548RefSeq:NP_567339.1STRING:3702.AT4G08700.1SUPFAM:0043518
TAIR:AT4G08700tair10-symbols:ATPUP13TMHMM:TMhelixUniGene:At.28790
UniProt:Q8RY83
Coordinates (TAIR10) chr4:-:5565998..5567286
Molecular Weight (calculated) 40140.20 Da
IEP (calculated) 4.52
GRAVY (calculated) 0.69
Length 361 amino acids
Sequence (TAIR10)
(BLAST)
001: MDEEEAMLLL KEEDEGTRRT SVPTQLMKLK RTHWWILVFI SIFFLISAQA IAVLLGRFYY NEGGNSKWIS TLVQTCGFPI LYLPLCFLPA SHSSSSSCSF
101: KTLVWIYLSL GFAIGLDNLL YSFGLLYLSA STYSILCSSQ LAFNGVFSYY INSQKITCLI LFSVLFLSVS AVLVSLDDDS NSPSGDSKWS YLIGCLCTVF
201: ASLIYSLQLS LMQFSFENVL KSETFSMVLE MQIYTSLVAS CVAVIGLFAS GEWMLLSVEM EEFHEGQVIY VLTLVGTAVS WQLGSVGAVA LIFLVSSLFS
301: NLIGTLSLIV TPLAAIAVFH DKLTEVKMVA MLIAFMGFGF YIYQNYLDDL KVQRAREAQA E
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)