AT4G02710.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.997 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Kinase interacting (KIP1-like) family protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Kinase interacting (KIP1-like) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: KIP1-like (InterPro:IPR011684); BEST Arabidopsis thaliana protein match is: kinase interacting (KIP1-like) family protein (TAIR:AT1G03080.1); Has 113312 Blast hits to 57291 proteins in 3105 species: Archae - 1581; Bacteria - 20592; Metazoa - 51557; Fungi - 9057; Plants - 6359; Viruses - 476; Other Eukaryotes - 23690 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:1193516..1197061 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 127717.00 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.83 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.77 | ||||||||||||||||||||||||||||||||||||||||
| Length | 1111 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MEIAAKSNSK RMYSWWWDSH NTPKNSKWLQ DNLADMDSNV KQMIKVLEED ADSFARRAEM YYRKRPELMK LVEEFYRAYR ALAERYNHAT GVIHKAHETI 0101: AEAFPNQVPL IFGDESHGGA LTNDVDPQTP DMPPPFRARG NPDEFQQDAL GFSLSHVHDV KRNIDFSEEP LFVSNGKARK GLNFNDHGDG KGRNGLKDHI 0201: LSESERASKA EAEVVALKDS LSKMQAEKQA SLALFEKNLE RLSNLESEVS RAQADSRGIN DRAASAEAEI QTLRETLYKL ESEKESSFLQ YHKCLQKIAD 0301: LEDGLSVAHK EAGERASKAE TETLALKRSL AKAETDKETA LIQYRQCLNT ISNLEERLRK AEEDARLINE RAEKAGVEVE NLKQTVSKLI KDKEASELQF 0401: QQCLNIIASL KVKLHHAQEE TQSLSHEIED GVAKLKFSEE KCLLLERSNQ NLHSELDSLL EKLGNQSQKL TEKQTELVKL WSCVQAEHLH FQEAETAFQT 0501: LQQLHSQSQE ELNNLAVELQ TVSQIMKDME MRNNELHEEL EQAKVENKGL NDLNFTMEKL VQKNLMLEKS ISYLNSELES FRRKLKTFEE ACQSLSEEKS 0601: CLISENQHNV IENTVLIEWL RQLRLEAVGI ATEKTDLEGK AKTIGDKLTD AETENLQLKR NLLSIRSEKH HLEDEITNVK DQLHEKEKEF EEIKMEKEKL 0701: IQEVFKERKQ VELWESQAAT FFCDKQISVV HETLIEATTR ELAEACKNLE SKSASRDADI EKLKRSQTIV LLNESIKSLE DYVFTHRESA GEVSKGADLM 0801: DEFLKLEGMC LRIKAIAEAI MEKEKFLMLE NTNTYSMLEA SLKQIKELKT GGGRSMRKQD GGSGRMRKQS HETEMVMKDI VLDQTSDGSS YEIVSKKGNS 0901: ELDHLGFVEL KPVKTHKTET KALSEESLIV EKVEIFDGFM DPNREVNKRR VLERLDSDLQ KLENLQITVE DLKSKVETVE KEKTKVGENE YKTIKGQLEE 1001: GEEAIEKLFT VNRKLTTKAE SEKDIDRRRR IFEHARRGTE KIGRLQSEIQ RIQFLLMKLE GEREHRLRSK ISDTKVLLRD YIYGRTRSVS MKKRTKKRSV 1101: FCGCVQQPES P |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)