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AT4G01210.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
golgi 0.999
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:22923678 (2012): Golgi
  • PMID:21433285 (2011): plasma membrane
  • PMID:19334764 (2009): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : glycosyl transferase family 1 protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
glycosyl transferase family 1 protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biosynthetic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, group 1 (InterPro:IPR001296); BEST Arabidopsis thaliana protein match is: UDP-Glycosyltransferase superfamily protein (TAIR:AT5G04480.1); Has 816 Blast hits to 811 proteins in 174 species: Archae - 9; Bacteria - 331; Metazoa - 0; Fungi - 0; Plants - 66; Viruses - 0; Other Eukaryotes - 410 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IEJSeggNOG:ENOG4111HG6EMBL:CP002687EMBL:KJ138774
EnsemblPlants:AT4G01210EnsemblPlants:AT4G01210.1entrez:828040GeneID:828040
GO:GO:0005768GO:GO:0005794GO:GO:0005802GO:GO:0016021
GO:GO:0016757Gramene:AT4G01210.1hmmpanther:PTHR12526hmmpanther:PTHR12526:SF412
InterPro:IPR001296KEGG:ath:AT4G01210ncoils:CoilOMA:KGRRPRM
Pfam:PF00534Proteomes:UP000006548RefSeq:NP_192030.4STRING:3702.AT4G01210.1
SUPFAM:SSF53756TAIR:AT4G01210TMHMM:TMhelixUniGene:At.32583
UniGene:At.3800UniProt:F4JHZ4
Coordinates (TAIR10) chr4:-:507738..512362
Molecular Weight (calculated) 119405.00 Da
IEP (calculated) 8.70
GRAVY (calculated) -0.43
Length 1031 amino acids
Sequence (TAIR10)
(BLAST)
0001: MGSLESGIPT KRDNGGVRGG RQQQQQQQQQ QFFLQRNRSR LSRFFLLKSF NYLLWISIIC VFFFFAVLFQ MFLPGLVIDK SDKPWISKEI LPPDLVGFRE
0101: KGFLDFGDDV RIEPTKLLMK FQRDAHGFNF TSSSLNTTLQ RFGFRKPKLA LVFGDLLADP EQVLMVSLSK ALQEVGYAIE VYSLEDGPVN SIWQKMGVPV
0201: TILKPNQESS CVIDWLSYDG IIVNSLRARS MFTCFMQEPF KSLPLIWVIN EETLAVRSRQ YNSTGQTELL TDWKKIFSRA SVVVFHNYLL PILYTEFDAG
0301: NFYVIPGSPE EVCKAKNLEF PPQKDDVVIS IVGSQFLYKG QWLEHALLLQ ALRPLFSGNY LESDNSHLKI IVLGGETASN YSVAIETISQ NLTYPKEAVK
0401: HVRVAGNVDK ILESSDLVIY GSFLEEQSFP EILMKAMSLG KPIVAPDLFN IRKYVDDRVT GYLFPKQNLK VLSQVVLEVI TEGKISPLAQ KIAMMGKTTV
0501: KNMMARETIE GYAALLENML KFSSEVASPK DVQKVPPELR EEWSWHPFEA FMDTSPNNRI ARSYEFLAKV EGHWNYTPGE AMKFGAVNDD SFVYEIWEEE
0601: RYLQMMNSKK RREDEELKSR VLQYRGTWED VYKSAKRADR SKNDLHERDE GELLRTGQPL CIYEPYFGEG TWSFLHQDPL YRGVGLSVKG RRPRMDDVDA
0701: SSRLPLFNNP YYRDALGDFG AFFAISNKID RLHKNSWIGF QSWRATARKE SLSKIAEDAL LNAIQTRKHG DALYFWVRMD KDPRNPLQKP FWSFCDAINA
0801: GNCRFAYNET LKKMYSIKNL DSLPPMPEDG DTWSVMQSWA LPTRSFLEFV MFSRMFVDSL DAQIYEEHHR TNRCYLSLTK DKHCYSRVLE LLVNVWAYHS
0901: ARRIVYIDPE TGLMQEQHKQ KNRRGKMWVK WFDYTTLKTM DEDLAEEADS DRRVGHWLWP WTGEIVWRGT LEKEKQKKNL EKEEKKKKSR DKLSRMRSRS
1001: GRQKVIGKYV KPPPENETVT GNSTLLNVVD A
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)