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AT3G62790.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
ASURE: mitochondrion
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : NADH-ubiquinone oxidoreductase-related
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
NADH-ubiquinone oxidoreductase-related; CONTAINS InterPro DOMAIN/s: NADH:ubiquinone oxidoreductase, iron-sulphur subunit 5 (InterPro:IPR019342); BEST Arabidopsis thaliana protein match is: NADH-ubiquinone oxidoreductase-related (TAIR:AT2G47690.1); Has 129 Blast hits to 129 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 62; Plants - 56; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-1140-MONOMERBioGrid:10768eggNOG:ENOG410J0NTeggNOG:ENOG410Y2MY
EMBL:AL162651EMBL:AY062842EMBL:AY088460EMBL:AY114576
EMBL:CP002686EnsemblPlants:AT3G62790EnsemblPlants:AT3G62790.1entrez:825454
GeneID:825454Genevisible:Q9LZI6GO:GO:0005739GO:GO:0005747
GO:GO:0005758GO:GO:0055114Gramene:AT3G62790.1hmmpanther:PTHR15224
HOGENOM:HOG000210394InParanoid:Q9LZI6IntAct:Q9LZI6InterPro:IPR019342
KEGG:ath:AT3G62790KO:K03938OMA:HTKEFARPaxDb:Q9LZI6
Pfam:PF10200Pfam:Q9LZI6PhylomeDB:Q9LZI6PIR:T48068
PRIDE:Q9LZI6PRO:PR:Q9LZI6ProteinModelPortal:Q9LZI6Proteomes:UP000006548
RefSeq:NP_191838.1STRING:3702.AT3G62790.1TAIR:AT3G62790TCDB:3.D.1.6.3
UniGene:At.22306UniProt:Q9LZI6
Coordinates (TAIR10) chr3:-:23223321..23224221
Molecular Weight (calculated) 9893.58 Da
IEP (calculated) 7.91
GRAVY (calculated) -1.25
Length 83 amino acids
Sequence (TAIR10)
(BLAST)
1: MASGWGITGN KGRCYDFWMD FSECMSHCRE PKDCTLLRED YLECLHHSKE FQRRNRIYKE EQRKLRAASR KGEETGDGTH THH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)