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AT3G60730.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
ASURE: extracellular
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Plant invertase/pectin methylesterase inhibitor superfamily
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Plant invertase/pectin methylesterase inhibitor superfamily; FUNCTIONS IN: enzyme inhibitor activity, pectinesterase activity; INVOLVED IN: cell wall modification; LOCATED IN: endomembrane system, cell wall, plant-type cell wall; EXPRESSED IN: flower; CONTAINS InterPro DOMAIN/s: Pectinesterase, active site (InterPro:IPR018040), Pectin lyase fold/virulence factor (InterPro:IPR011050), Pectinesterase inhibitor (InterPro:IPR006501), Pectinesterase, catalytic (InterPro:IPR000070), Pectin lyase fold (InterPro:IPR012334); BEST Arabidopsis thaliana protein match is: Plant invertase/pectin methylesterase inhibitor superfamily (TAIR:AT2G45220.1); Has 2657 Blast hits to 2607 proteins in 332 species: Archae - 6; Bacteria - 615; Metazoa - 1; Fungi - 196; Plants - 1814; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G60730-MONOMEREC:3.1.1.11eggNOG:COG4677eggNOG:ENOG410IH2T
EMBL:AK228563EMBL:AL162295EMBL:BT006181EMBL:CP002686
EnsemblPlants:AT3G60730EnsemblPlants:AT3G60730.1entrez:825244Gene3D:1.20.140.40
Gene3D:2.160.20.10GeneID:825244Genevisible:Q84R10GO:GO:0004857
GO:GO:0005576GO:GO:0005618GO:GO:0030599GO:GO:0042545
GO:GO:0045330GO:GO:0045490Gramene:AT3G60730.1gramene_pathway:3.1.1.11
gramene_pathway:PWY-1081hmmpanther:PTHR31707hmmpanther:PTHR31707:SF35HOGENOM:HOG000217409
InParanoid:Q84R10InterPro:IPR000070InterPro:IPR006501InterPro:IPR011050
InterPro:IPR012334InterPro:IPR033131iPTMnet:Q84R10KEGG:00040+3.1.1.11
KEGG:00500+3.1.1.11KEGG:ath:AT3G60730OMA:CDIFVRRPaxDb:Q84R10
Pfam:PF01095Pfam:PF04043Pfam:Q84R10PIR:T47884
PRIDE:Q84R10PRO:PR:Q84R10PROSITE:PS00503ProteinModelPortal:Q84R10
Proteomes:UP000006548RefSeq:NP_191632.2scanprosite:PS00503SMART:SM00856
SMR:Q84R10STRING:3702.AT3G60730.1SUPFAM:SSF101148SUPFAM:SSF51126
TAIR:AT3G60730TMHMM:TMhelixUniGene:At.27841UniGene:At.43228
UniPathway:UPA00545UniProt:Q84R10
Coordinates (TAIR10) chr3:+:22444955..22447226
Molecular Weight (calculated) 57880.70 Da
IEP (calculated) 9.71
GRAVY (calculated) -0.37
Length 519 amino acids
Sequence (TAIR10)
(BLAST)
001: MSTFVKVTDL ITIMFFLAIA AVITASNTAE LDVLEMARTA VVEAKTSFGS MAVTEATSEV AGSYYKLGLS ECEKLYDESE ARLSKLVVDH ENFTVEDVRT
101: WLSGVLANHH TCLDGLIQQR QGHKPLVHSN VTFVLHEALA FYKKSRGHMK KRLHGPARQG HGPTRPKHRP TRPNHGPGRS HHGPSRPNQN GGMLVSWNPT
201: SSRADFVVAR DGSATHRTIN QALAAVSRMG KSRLNRVIIY IKAGVYNEKI EIDRHMKNIM LVGDGMDRTI VTNNRNVPDG STTYGSATFG VSGDGFWARD
301: ITFENTAGPH KHQAVALRVS SDLSLFYRCS FKGYQDTLFT HSLRQFYRDC HIYGTIDFIF GDAAAVFQNC DIFVRRPMDH QGNMITAQGR DDPHTNSGIS
401: IQHSRIRAAP EFEAVKGRFK SYLGRPWKKY SRTVFLKTDI DELIDPRGWR EWSGSYALST LYYGEFMNTG AGAGTGRRVN WPGFHVLRGE EEASPFTVSR
501: FIQGDSWIPI TGVPFSAGV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)