suba logo
AT3G60130.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26572690 (2016): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : beta glucosidase 16
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
beta glucosidase 16 (BGLU16); FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 1 (InterPro:IPR001360), Glycoside hydrolase, family 1, active site (InterPro:IPR018120), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: beta glucosidase 13 (TAIR:AT5G44640.1); Has 11475 Blast hits to 11098 proteins in 1475 species: Archae - 144; Bacteria - 7936; Metazoa - 718; Fungi - 200; Plants - 1457; Viruses - 0; Other Eukaryotes - 1020 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G60130-MONOMERBioCyc:ARA:GQT-68-MONOMERBioCyc:ARA:GQT-69-MONOMERBioGrid:10497
CAZy:GH1EC:3.2.1.21eggNOG:COG2723eggNOG:KOG0626
EMBL:AB047804EMBL:AL138658EMBL:AY045953EMBL:AY113935
EMBL:CP002686EnsemblPlants:AT3G60130EnsemblPlants:AT3G60130.1entrez:825183
ExpressionAtlas:Q9M1D0Gene3D:3.20.20.80GeneID:825183Genevisible:Q9M1D0
GO:GO:0005975GO:GO:0008422hmmpanther:PTHR10353HOGENOM:HOG000088630
InParanoid:Q9M1D0IntAct:Q9M1D0InterPro:IPR001360InterPro:IPR013781
InterPro:IPR017853InterPro:IPR033132iPTMnet:Q9M1D0OMA:HEGYITG
PANTHER:PTHR10353PaxDb:Q9M1D0Pfam:PF00232Pfam:Q9M1D0
Pfscan:PS51257PhylomeDB:Q9M1D0PIR:T47837PRIDE:Q9M1D0
PRINTS:PR00131PRO:PR:Q9M1D0PROSITE:PS00653ProteinModelPortal:Q9M1D0
Proteomes:UP000006548RefSeq:NP_191572.1scanprosite:PS00653SMR:Q9M1D0
STRING:3702.AT3G60130.1SUPFAM:SSF51445TAIR:AT3G60130tair10-symbols:BGLU16
UniGene:At.24631UniProt:Q9M1D0
Coordinates (TAIR10) chr3:+:22210343..22213650
Molecular Weight (calculated) 58045.80 Da
IEP (calculated) 6.45
GRAVY (calculated) -0.28
Length 514 amino acids
Sequence (TAIR10)
(BLAST)
001: MRGKFLSLLL LITLACIGVS AKKHSTRPRL RRNDFPQDFV FGSATSAYQC EGAAHEDGRG PSIWDSFSEK FPEKIMDGSN GSIADDSYNL YKEDVNLLHQ
101: IGFDAYRFSI SWSRILPRGT LKGGINQAGI EYYNNLINQL ISKGVKPFVT LFHWDLPDAL ENAYGGLLGD EFVNDFRDYA ELCFQKFGDR VKQWTTLNEP
201: YTMVHEGYIT GQKAPGRCSN FYKPDCLGGD AATEPYIVGH NLLLAHGVAV KVYREKYQAT QKGEIGIALN TAWHYPYSDS YADRLAATRA TAFTFDYFME
301: PIVYGRYPIE MVSHVKDGRL PTFTPEESEM LKGSYDFIGV NYYSSLYAKD VPCATENITM TTDSCVSLVG ERNGVPIGPA AGSDWLLIYP KGIRDLLLHA
401: KFRYNDPVLY ITENGVDEAN IGKIFLNDDL RIDYYAHHLK MVSDAISIGV NVKGYFAWSL MDNFEWSEGY TVRFGLVFVD FEDGRKRYLK KSAKWFRRLL
501: KGAHGGTNEQ VAVI
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)