AT3G59710.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.504 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : NAD(P)-binding Rossmann-fold superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
NAD(P)-binding Rossmann-fold superfamily protein; FUNCTIONS IN: oxidoreductase activity, binding, catalytic activity; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: leaf lamina base, root, carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: NAD(P)-binding domain (InterPro:IPR016040), Glucose/ribitol dehydrogenase (InterPro:IPR002347), Short-chain dehydrogenase/reductase SDR (InterPro:IPR002198); BEST Arabidopsis thaliana protein match is: NAD(P)-binding Rossmann-fold superfamily protein (TAIR:AT5G51030.1); Has 60289 Blast hits to 60264 proteins in 3086 species: Archae - 599; Bacteria - 42094; Metazoa - 4067; Fungi - 2569; Plants - 1993; Viruses - 0; Other Eukaryotes - 8967 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:22055220..22057156 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 33257.30 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.90 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.09 | ||||||||||||||||||||||||||||||||||||
| Length | 302 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDVVTLMYGL ITYIIYAYGI IHEWWSEETT AVVTGANKGI GFAVVKRLLE LGLTVVLTAR NAENGSQAAE SLRRIGFGNV HFCCLDISDP SSIAAFASWF 101: GRNLGILDIL VNNAAVSFNA VGENLIKEPE TIIKTNFYGA KLLTEALLPL FRRSVSVSRI LNMSSRLGTL NKLRSPSIRR ILESEDLTNE QIDATLTQFL 201: QDVKSGTWEK QGWPENWPDY AISKLALNAY SRVLARRYDG KKLSVNCLCP GFTRTSMTGG QGTHTADEAA AIVAKLVLLP PEKLATGKFY ICVESKKLIS 301: KL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)