AT3G59430.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 10 growth stages; Has 332 Blast hits to 125 proteins in 52 species: Archae - 0; Bacteria - 61; Metazoa - 17; Fungi - 14; Plants - 37; Viruses - 2; Other Eukaryotes - 201 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:21964484..21966497 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 49483.00 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 5.27 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.82 | ||||||||||||||||||||||||||||
| Length | 451 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVRKEDVDFY CGFSRKELQS LCKKYNLPAN RSSSDMAESL ASYFEKNNLN PVSFGVPGNQ DSSATTSRAP AIRTWNVKRD SYGNKLDVPR EDYVQGAVAR 101: EPGIILGNNT PYQERNGNDG LIDFTSAPPY MRKLNEKGPT ANSKRADSRL ENRMRDVDSG DNPSSSSFEF HVSLEEGISL SVDLNFNPSD WINSMRDEVN 201: VCDSMRRRKS PHSDLGITEC KKQKSSGQDT DGHVRRESSL SPPMKDNAHL PSDHHPNGER SLASSAIEPC NRIKESSDTC KEKSGLNLSI PDSSGPCQIA 301: SSCVESYSKS CCVNPVDLDC IIPPGKKLAS ESDMVAAEQN HSAGDLLVEI PKNPSMESFQ IVGNSSTVIC PRGAGSELSS SEAEAYHSNQ PCSPRKTSRS 401: STISSPEFII DRESTSYSES FKFRCNGGKS LPPNTEEQEK SEVLSEQARS E |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)