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AT3G58090.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.994
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Disease resistance-responsive (dirigent-like protein) family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Disease resistance-responsive (dirigent-like protein) family protein; CONTAINS InterPro DOMAIN/s: Plant disease resistance response protein (InterPro:IPR004265); BEST Arabidopsis thaliana protein match is: Disease resistance-responsive (dirigent-like protein) family protein (TAIR:AT1G65870.1); Has 879 Blast hits to 874 proteins in 45 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 871; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IXRVeggNOG:ENOG410YGJAEMBL:AK117592EMBL:AL132977
EMBL:CP002686EnsemblPlants:AT3G58090EnsemblPlants:AT3G58090.1entrez:3769734
GeneID:3769734Genevisible:F4J4N3GO:GO:0048046hmmpanther:PTHR21495
hmmpanther:PTHR21495:SF71HOGENOM:HOG000191547InParanoid:F4J4N3InterPro:IPR004265
KEGG:ath:AT3G58090OMA:MIAKDEPPaxDb:F4J4N3Pfam:F4J4N3
Pfam:PF03018PIR:T46031PRIDE:F4J4N3PRO:PR:F4J4N3
ProteinModelPortal:F4J4N3Proteomes:UP000006548RefSeq:NP_191368.2SMR:F4J4N3
TAIR:AT3G58090UniGene:At.47902UniProt:F4J4N3
Coordinates (TAIR10) chr3:-:21512479..21513905
Molecular Weight (calculated) 29899.00 Da
IEP (calculated) 4.67
GRAVY (calculated) -0.47
Length 271 amino acids
Sequence (TAIR10)
(BLAST)
001: MEDTGSIKQE AQSHPPGIFE IPGEPAVVIN GVPDEPQTDC MIAKDEPISS GTVGSGEWLE GREVRKFFLG RYYSGTVTKF DKQSGWYRVE YEDGDSEDLD
101: WSELEEVLLP LDTKNSNTNA QSEYGEAGQR VNVKAPYPGH KPEKLVTTTV KAPYPGHKPE KLIPLVDDIL TVGPEITSEE VGRAQGIFAS ADQNNFGLLM
201: AFNFVFTKGE FSGSTVSMYG RNPIFSKVRE MPIIGGTGAF RFGRGYAQAK TFTFNTTSGN AVVKYNVYIW H
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)