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AT3G57140.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
vacuole 0.750
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : sugar-dependent 1-like
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
sugar-dependent 1-like (SDP1-LIKE); FUNCTIONS IN: GTP binding; INVOLVED IN: metabolic process, lipid metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Acyl transferase/acyl hydrolase/lysophospholipase (InterPro:IPR016035), Protein of unknown function DUF3336 (InterPro:IPR021771), ARF/SAR superfamily (InterPro:IPR006689), Patatin (InterPro:IPR002641); BEST Arabidopsis thaliana protein match is: Patatin-like phospholipase family protein (TAIR:AT5G04040.1); Has 1079 Blast hits to 1061 proteins in 366 species: Archae - 0; Bacteria - 487; Metazoa - 11; Fungi - 361; Plants - 73; Viruses - 0; Other Eukaryotes - 147 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G57140-MONOMERBioCyc:ARA:GQT-1538-MONOMEREC:3.1.1.3eggNOG:COG1752
eggNOG:KOG2214EMBL:AK117921EMBL:AL138655EMBL:BT005969
EMBL:CP002686EnsemblPlants:AT3G57140EnsemblPlants:AT3G57140.1EnsemblPlants:AT3G57140.2
entrez:824881GeneID:824881Genevisible:Q9M1I6GO:GO:0004806
GO:GO:0005811GO:GO:0016021GO:GO:0016042Gramene:AT3G57140.1
Gramene:AT3G57140.2hmmpanther:PTHR14226hmmpanther:PTHR14226:SF30HOGENOM:HOG000238293
InParanoid:Q9M1I6InterPro:IPR002641InterPro:IPR016035InterPro:IPR021771
iPTMnet:Q9M1I6KEGG:ath:AT3G57140KO:K14674OMA:KIRCAVE
PaxDb:Q9M1I6Pfam:PF01734Pfam:PF11815Pfam:Q9M1I6
PhylomeDB:Q9M1I6PIR:T47774PRIDE:Q9M1I6PRO:PR:Q9M1I6
ProteinModelPortal:Q9M1I6Proteomes:UP000006548RefSeq:NP_191273.1RefSeq:NP_974449.1
STRING:3702.AT3G57140.1SUPFAM:SSF52151TAIR:AT3G57140tair10-symbols:SDP1-LIKE
UniGene:At.34865UniProt:Q9M1I6
Coordinates (TAIR10) chr3:-:21150742..21153315
Molecular Weight (calculated) 89938.60 Da
IEP (calculated) 6.81
GRAVY (calculated) -0.26
Length 801 amino acids
Sequence (TAIR10)
(BLAST)
001: MDISNEAGVD AFSIIGPTTI IGRTIAVRIL FCNSVSIFRH KVFRILKFFL RGGRVLLSPF VSLLHPRNPQ GILVMVTTMA FLLNRYTSLK AKAEMAYRRK
101: FWRNMMRAAL TYEEWSHAAK MLDKETPKVN ETDLFDVELV SNKLDELKHR RHEGSLRDII FCMRADLVRN LGNMCNPELH KGRLHVPRLI KEYIDEVSTQ
201: LRMVCDMDTE ELSLEEKLSF MHETRHAYGR TALLLSGGAS LGAFHLGVVK TLVEHKLLPR IIAGSSVGSV MCAVVGTRSW PELQSFFEGS WHALQFFDQM
301: GGIFTTVKRV MTQGAVHEIR HLQWKLRNLT NNLTFQEAYD ITGRILGITV CSLRKHEPPR CLNYLTSPHV VIWSAVTASC AFPGLFEAQE LMAKDRTGEI
401: VPYHPPFNLD PEEGSASVRR WRDGSLEMDL PMIQLKELFN VNHFIVSQAN PHIAPFLRMK EFVRACGGRF AAKLAQLAEM EVKHRCNQVL ELGLPLREVA
501: SLFAQEWEGD VTIVMPATFS QYLKIIQNPS NVEIQKAANQ GRRCTWEKLA VIKANFGIEL ALDECVTVLN HMRRLKRSAE RAAAFSAISS SPPSKHLLAG
601: TNRFNASKRI PSWNCIARQN SSGSVDDDVL AEASRLYQHI VVGSGRNSNR TSNLSHTYDA GSECDSPEAE DWTRSGGPLM RTNSAQMFTD YVQNLDAVDP
701: EQIRASENDS IVAASSSSHS ITVTEGDYLQ TGRTHNGFVL NLVRGENLRM NSEPEDSQNE SEIPETPESV QLDSPEKDII DGESSASEDG DAQANLIHDH
801: E
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)