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AT1G15490.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.537
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : alpha/beta-Hydrolases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
alpha/beta-Hydrolases superfamily protein; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT1G80280.1); Has 5830 Blast hits to 5818 proteins in 1057 species: Archae - 56; Bacteria - 4179; Metazoa - 223; Fungi - 71; Plants - 420; Viruses - 1; Other Eukaryotes - 880 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0596eggNOG:KOG1454EMBL:AC007591EMBL:AY065435
EMBL:BT002364EMBL:CP002684EnsemblPlants:AT1G15490EnsemblPlants:AT1G15490.1
entrez:838119ESTHER:arath-F9L1.44Gene3D:3.40.50.1820GeneID:838119
GO:GO:0016021GO:GO:0016787Gramene:AT1G15490.1hmmpanther:PTHR10992
hmmpanther:PTHR10992:SF898HOGENOM:HOG000005844InterPro:IPR000073InterPro:IPR029058
KEGG:ath:AT1G15490OMA:HDEGELPPfam:PF12697PhylomeDB:Q9XI20
Proteomes:UP000006548RefSeq:NP_173002.1SMR:Q9XI20STRING:3702.AT1G15490.1
SUPFAM:SSF53474TAIR:AT1G15490TMHMM:TMhelixUniGene:At.28486
UniProt:Q9XI20
Coordinates (TAIR10) chr1:-:5320859..5323422
Molecular Weight (calculated) 71286.20 Da
IEP (calculated) 9.60
GRAVY (calculated) 0.14
Length 648 amino acids
Sequence (TAIR10)
(BLAST)
001: MAKSWFLVEK ARRCLRTVFF MVAMLASLLV SSLPLLVAIG DVLVPSFLLS SFTCVTCYGA KEHLRRYGFK RSLTDIPIVS VVRSFLVICI YLLSDVPALS
101: HGPYLGTVSL CSVVSVLLLS VKACLFTVNS QLNNEASFSP SRKRLHLKKS WGMPVLFLSS VVFALGHTVV AYRTSCRARR KILYHRVDPE AVLSCKSIFS
201: GHQKVPRSPT PVVGKASKFD GEARRKPLSH DEGELPVRLL ADVDSLFVTI RGLTVHYKLC SPGSPRQSIS SNVLEANSSY NTPEIMAGRS KFDRKVLSMV
301: TKSQHHHHHR SYNSLFNNSS LHDPLLDGSP TSPLLFKEIK EGTGLVDDMN VFNFGAEEQD LGESGQFGVV LVHGFGGGVF SWRHVMGSLA QQLGCVVTAF
401: DRPGWGLTAR PHKNDLEERQ LLNPYSLENQ VEMLIAFCYE MGFSSVVFVG HDDGGLLALK AAQRLMATND PIKVVVKGVV LLNTSLSREV VPAFARILLH
501: TSLGKKHLVR PLLRTEIAQV VNRRAWYDPA KMTTDVLRLY KAPLHVEGWD EALHEIGRLS SEMVLAPQNA ASLLKAVENL PVLVIAGAED ALVPLKSSQG
601: MASKLLNSRL VAISGCGHLP HEECPKALLA AMSPFITRLV IRPDLQSQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)