AT3G57120.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: protein kinase family protein / peptidoglycan-binding LysM domain-containing protein (TAIR:AT1G51940.1); Has 39405 Blast hits to 37293 proteins in 1762 species: Archae - 14; Bacteria - 4560; Metazoa - 7143; Fungi - 1468; Plants - 21966; Viruses - 110; Other Eukaryotes - 4144 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:21139099..21140469 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 50512.40 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.46 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.61 | ||||||||||||||||||||||||||||||||||||
| Length | 456 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSDLLGHLHK FEQEFVFMCK TKMGVNASEP KRTRSRPSQS QGRHPSTRRS PSTSNTGTTT TTTTSNSNKT GASSSSSGAA SSSVASRTSL ASLRESLPEN 101: PHIYNVSEIR AATNNFLANR LSSSSSKASW RCNLRGKEVV VFQRKFRRRI DTDELRDRLS DICRSHHGSI INLLGASVSG GGRVGGGGGG GGDHIYLVYE 201: YVNGASLADC LRNPKNPKFT VLSNWTSRIQ IATDLAHGLD YIHNKTGLKI ENLVHNHIKS SAVIVTEPDF NAKICHFGTA QLCGETDEMS LERDESRNSR 301: RSDSRAIRFE GVRGYMSPEF QNLGIATQKS DVYAFGVMML ELLSGEEPLK YRYDKATGDF ERTSVIETAR AAIEDGDGDR DGRLRRWMDR RLEDSFPVTV 401: VEKLTRLALD CVQDDPVNRP EMGRVAGKIS QLYLESEKWS ANMKRPTDIT VSFAPR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)