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AT3G55940.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Phosphoinositide-specific phospholipase C family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Phosphoinositide-specific phospholipase C family protein; FUNCTIONS IN: phosphoinositide phospholipase C activity, phospholipase C activity, phosphoric diester hydrolase activity; INVOLVED IN: signal transduction, intracellular signaling pathway, lipid metabolic process; LOCATED IN: plasma membrane; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 4 anthesis, LP.10 ten leaves visible, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Phospholipase C, phosphoinositol-specific, EF-hand-like (InterPro:IPR015359), Phospholipase C, phosphatidylinositol-specific , X domain (InterPro:IPR000909), C2 calcium/lipid-binding domain, CaLB (InterPro:IPR008973), Phospholipase C, phosphoinositol-specific (InterPro:IPR001192), Phospholipase C, phosphatidylinositol-specific, Y domain (InterPro:IPR001711), PLC-like phosphodiesterase, TIM beta/alpha-barrel domain (InterPro:IPR017946), C2 membrane targeting protein (InterPro:IPR018029), C2 calcium-dependent membrane targeting (InterPro:IPR000008); BEST Arabidopsis thaliana protein match is: phospholipase C 2 (TAIR:AT3G08510.2); Has 7225 Blast hits to 3392 proteins in 352 species: Archae - 10; Bacteria - 635; Metazoa - 3351; Fungi - 1029; Plants - 675; Viruses - 45; Other Eukaryotes - 1480 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G55940-MONOMERBioGrid:10076BRENDA:3.1.4.11EC:3.1.4.11
eggNOG:ENOG410XPSWeggNOG:KOG0169EMBL:AL163832EMBL:CP002686
EnsemblPlants:AT3G55940EnsemblPlants:AT3G55940.1entrez:824760Gene3D:1.10.238.10
Gene3D:2.60.40.150Gene3D:3.20.20.190GeneID:824760Genevisible:Q9LY51
GO:GO:0004435GO:GO:0004871GO:GO:0005622GO:GO:0005886
GO:GO:0016042GO:GO:0035556gramene_pathway:3.1.4.11gramene_pathway:LIPASYN-PWY
hmmpanther:PTHR10336hmmpanther:PTHR10336:SF92HOGENOM:HOG000244119InParanoid:Q9LY51
InterPro:IPR000008InterPro:IPR000909InterPro:IPR001192InterPro:IPR001711
InterPro:IPR011992InterPro:IPR015359InterPro:IPR017946iPTMnet:Q9LY51
KEGG:00562+3.1.4.11KEGG:04070+3.1.4.11KEGG:ath:AT3G55940KO:K05857
OMA:KASEKYAPANTHER:PTHR10336PaxDb:Q9LY51Pfam:PF00168
Pfam:PF00387Pfam:PF00388Pfam:PF09279Pfam:Q9LY51
Pfscan:PS50004Pfscan:PS50007Pfscan:PS50008PhylomeDB:Q9LY51
PIR:T49206PRIDE:Q9LY51PRINTS:PR00390PRO:PR:Q9LY51
PROSITE:PS50004PROSITE:PS50007PROSITE:PS50008ProteinModelPortal:Q9LY51
Proteomes:UP000006548Reactome:R-ATH-114604Reactome:R-ATH-1855204Reactome:R-ATH-202433
Reactome:R-ATH-399997Reactome:R-ATH-416476Reactome:R-ATH-434316Reactome:R-ATH-5607764
RefSeq:NP_191153.1SMART:SM00148SMART:SM00149SMART:SM00239
SMR:Q9LY51STRING:3702.AT3G55940.1SUPFAM:SSF47473SUPFAM:SSF49562
SUPFAM:SSF51695TAIR:AT3G55940UniGene:At.53946UniProt:Q9LY51
Coordinates (TAIR10) chr3:+:20747787..20750184
Molecular Weight (calculated) 66465.30 Da
IEP (calculated) 5.68
GRAVY (calculated) -0.45
Length 584 amino acids
Sequence (TAIR10)
(BLAST)
001: MSKQTYKVCF CFRRRYRHTV SVAPAEIKTL FDNYSDKGLM TTDLLLRFLI DVQKQDKATK EEAQDIVNAS SSLLHRNGLH LDAFFKYLFA VTNSPLSSLE
101: VHQDMDAPLS HYFIYTGHNS YLTGNQLSSD CSELPIIEAL KKGVRVIELD IWPNSDEDGI DVLHGRTLTS PVELIKCLRA IREHAFDVSD YPVVVTLEDH
201: LTPKLQAKVA EMVTDIFGEM LFTPPSGECL KEFPSPAFLK KRIMISTKPP KEYKAATDDD LVKKGRDLGD KEVWGREVPS FIRRDRSVDK NDSNGDDDDD
301: DDDDDDDDDG DDKIKKNAPP EYKHLIAIEA GKPKGGITEC LKVDPDKVRR LSLSEEQLEK ASEKYAKQIV RFTQRNLLRV YPKGTRITSS NYNPLIAWSH
401: GAQMVAFNMQ GLGRSLWVMQ GMFRGNGGCG YIKKPDLLLK SNAVFDPEAT LPVKTTLRVT IYMGEGWYYD FPHTHFDRYS PPDFYTRVGI AGVPADTVMK
501: KTKTLEDNWI PAWDEVFEFP LTVPELALLR IEVHEYDMSE KDDFGGQICL PVWELRQGIR AVPLRNQDGV KCRSVKLLVR LEFV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)