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AT3G55040.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31186290 (2019): plastid plastid stroma
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:27137770 (2016): plastid plastid stroma
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:24124904 (2013): plastid
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:21531424 (2011): plastid
  • PMID:20423899 (2010): plastid
  • PMID:20061580 (2010): plastid plastid stroma
  • PMID:18633119 (2008): plastid plastid stroma
  • PMID:18431481 (2008): plastid plastid stroma
  • PMID:16207701 (2006): plastid
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : glutathione transferase lambda 2
Curator
Summary (TAIR10)
Encodes a member of the lambda family of glutathione transferases. It has thiol transferase activity and self S-glutathionylation activity in vitro.
Computational
Description (TAIR10)
glutathione transferase lambda 2 (GSTL2); INVOLVED IN: protein amino acid glutathionylation; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: Glutathione S-transferase family protein (TAIR:AT5G02790.1); Has 2794 Blast hits to 2712 proteins in 545 species: Archae - 4; Bacteria - 768; Metazoa - 398; Fungi - 95; Plants - 1147; Viruses - 0; Other Eukaryotes - 382 (source: NCBI BLink).
Protein Annotations
EC:2.5.1.18eggNOG:ENOG410XSIXeggNOG:KOG0406EMBL:AK118180
EMBL:AL132970EMBL:BT030006EMBL:CP002686EnsemblPlants:AT3G55040
EnsemblPlants:AT3G55040.1entrez:824670Gene3D:1.20.1050.10Gene3D:3.40.30.10
GeneID:824670Genevisible:Q9M2W2GO:GO:0004364GO:GO:0006749
GO:GO:0009507GO:GO:0009570GO:GO:0009636GO:GO:0010731
Gramene:AT3G55040.1hmmpanther:PTHR11260hmmpanther:PTHR11260:SF222HOGENOM:HOG000239968
InParanoid:Q9M2W2InterPro:IPR004045InterPro:IPR010987InterPro:IPR012336
KEGG:ath:AT3G55040KO:K00799OMA:DERAYPPPaxDb:Q9M2W2
Pfam:PF13410Pfam:PF13417Pfam:Q9M2W2Pfscan:PS50404
Pfscan:PS50405PhylomeDB:Q9M2W2PIR:T47643PRIDE:Q9M2W2
PRO:PR:Q9M2W2PROSITE:PS50404PROSITE:PS50405ProteinModelPortal:Q9M2W2
Proteomes:UP000006548Reactome:R-ATH-156581Reactome:R-ATH-156590Reactome:R-ATH-196836
RefSeq:NP_191064.1SMR:Q9M2W2STRING:3702.AT3G55040.1SUPFAM:SSF47616
SUPFAM:SSF52833TAIR:AT3G55040tair10-symbols:GSTL2UniGene:At.20918
UniGene:At.48769UniProt:Q9M2W2
Coordinates (TAIR10) chr3:-:20398718..20400305
Molecular Weight (calculated) 33059.30 Da
IEP (calculated) 7.40
GRAVY (calculated) -0.33
Length 292 amino acids
Sequence (TAIR10)
(BLAST)
001: MSVGLKVSAF LHPTLALSSR DVSLSSSSSS LYLDRKILRP GSGRRWCKSR RTEPILAVVE SSRVPELDSS SEPVQVFDGS TRLYISYTCP FAQRAWIARN
101: YKGLQNKIEL VPIDLKNRPA WYKEKVYSAN KVPALEHNNR VLGESLDLIK YIDTNFEGPS LTPDGLEKQV VADELLSYTD SFSKAVRSTL NGTDTNAADV
201: AFDYIEQALS KFNEGPFFLG QFSLVDVAYA PFIERFRLIL SDVMNVDITS GRPNLALWIQ EMNKIEAYTE TRQDPQELVE RYKRRVQAEA RL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)