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AT3G51610.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
endoplasmic reticulum 0.382
vacuole 0.326
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: endomembrane system; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 53 Blast hits to 53 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IGHNeggNOG:ENOG4111KVBEMBL:AK227141EMBL:AY136426
EMBL:BT006266EMBL:CP002686EnsemblPlants:AT3G51610EnsemblPlants:AT3G51610.1
entrez:824324GeneID:824324GO:GO:0005886GO:GO:0006979
GO:GO:0009555GO:GO:0016021Gramene:AT3G51610.1hmmpanther:PTHR36768
hmmpanther:PTHR36768:SF1HOGENOM:HOG000030857KEGG:ath:AT3G51610OMA:HVLVRYT
PhylomeDB:Q8L776Proteomes:UP000006548RefSeq:NP_566953.1STRING:3702.AT3G51610.1
TAIR:AT3G51610TMHMM:TMhelixUniGene:At.22458UniProt:Q8L776
Coordinates (TAIR10) chr3:-:19139715..19141986
Molecular Weight (calculated) 26071.60 Da
IEP (calculated) 9.65
GRAVY (calculated) 0.00
Length 230 amino acids
Sequence (TAIR10)
(BLAST)
001: MAGMAAVAGL RPWNAFIQAL VLISLSFPFL SSAYRPGDIV RMSKMGQYHS SRTTWHDVIG KHCPIFAVNR EVLIPIAKPI GYTGTDPYKI KFQVGSEKFL
101: IHWLLVINRK SSEVPMIDVN LRYSGGDLLG VTAQVIDMPH SYLNTHPEIR KQFWDPQHWP KHVLVRYTWK EQSEIDVSSG FYVLFGSALT FSFVLSIYVL
201: QSSREKLARF VRETVVESSS MNVGEFGKGD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)