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AT3G50800.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66580.1); Has 249 Blast hits to 249 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 249; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J00SeggNOG:ENOG410Z0XVEMBL:AL049862EMBL:BT004127
EMBL:BT004986EMBL:CP002686EnsemblPlants:AT3G50800EnsemblPlants:AT3G50800.1
entrez:824244GeneID:824244Gramene:AT3G50800.1hmmpanther:PTHR33052
hmmpanther:PTHR33052:SF17HOGENOM:HOG000238862InterPro:IPR025322KEGG:ath:AT3G50800
OMA:VKRNGCGPfam:PF14009PhylomeDB:Q9SVL8PIR:T08401
Proteomes:UP000006548RefSeq:NP_190649.1STRING:3702.AT3G50800.1TAIR:AT3G50800
UniGene:At.35454UniProt:Q9SVL8
Coordinates (TAIR10) chr3:-:18882444..18882902
Molecular Weight (calculated) 16279.30 Da
IEP (calculated) 7.09
GRAVY (calculated) -0.35
Length 152 amino acids
Sequence (TAIR10)
(BLAST)
001: MGACASRESR RTETAKLILP DGTLQEFSTP VKVWQILQKN PTSFVCNSDD MDFDDAVLAV PGSEDLRPGE LYFVLPLTWL NHPLRADEMA ALAVKASSAL
101: AKSGGGGLSY NDEDVGECRV RRVKRNGCGG RGCGGGGKGR RKFTAELSSI AE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)