AT3G50790.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:plastid 1.000 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : esterase/lipase/thioesterase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
esterase/lipase/thioesterase family protein; FUNCTIONS IN: hydrolase activity, carboxylesterase activity; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0017, hydrolase-like, conserved site (InterPro:IPR000952), AB-hydrolase YheT, putative (InterPro:IPR012020), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G49950.1); Has 2554 Blast hits to 2547 proteins in 951 species: Archae - 0; Bacteria - 1494; Metazoa - 334; Fungi - 200; Plants - 135; Viruses - 0; Other Eukaryotes - 391 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr3:-:18880074..18881940 | ||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 45172.60 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 7.02 | ||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.20 | ||||||||||||||||||||||||||||||||||||||||||||||||
Length | 408 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MARVAFATSS PPLISSVRTL RRHFSVFAAA NPEMSRPSHH SSLEVIGGGS DRFLPSLKDS LAKPYNAFPL IGFNRHVETI YASFFRSVPF VRLRRECLRT 101: KDNGSVALDW VAGEDRHFPP DSPILILLPG LTGGSQDSYV RHMLLRAQSK KWRCVVFNSR GCGDSPVTTP QFYSASFLGD IGEVIDHVVD KFPKANLYAA 201: GWSLGGNILV NYLGQESHNC PLTAAVSLCN PFDLVIADED FHKGFNNVYD KALSKSLRRI FSKHSLLFED IGGEFNIPLA ANAETVRDFD DGLTRVSFGF 301: KSVDEYYSKS SSSKAIKHVR IPLLCIQAAN DPIAPERGIP RDDIKANPNC VLIVTPRGGH LGWVAGEEAP NGAPWTDQVV MEFLQHVENR ETINGERSFE 401: DVHDQIQV |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)