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AT3G50790.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : esterase/lipase/thioesterase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
esterase/lipase/thioesterase family protein; FUNCTIONS IN: hydrolase activity, carboxylesterase activity; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0017, hydrolase-like, conserved site (InterPro:IPR000952), AB-hydrolase YheT, putative (InterPro:IPR012020), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G49950.1); Has 2554 Blast hits to 2547 proteins in 951 species: Archae - 0; Bacteria - 1494; Metazoa - 334; Fungi - 200; Plants - 135; Viruses - 0; Other Eukaryotes - 391 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G50790-MONOMEReggNOG:COG0429eggNOG:KOG1838EMBL:AL049862
EMBL:CP002686EnsemblPlants:AT3G50790EnsemblPlants:AT3G50790.1entrez:824243
ESTHER:arath-At3g50790Gene3D:3.40.50.1820GeneID:824243Gramene:AT3G50790.1
gramene_pathway:4.3.1.18gramene_pathway:PWY-6196hmmpanther:PTHR10794InterPro:IPR000073
InterPro:IPR000952InterPro:IPR012020InterPro:IPR029058KEGG:00051+3.1.1.-
KEGG:00053+3.1.1.-KEGG:00363+3.1.1.-KEGG:00365+3.1.1.-KEGG:00534+3.1.1.-
KEGG:00564+3.1.1.-KEGG:00623+3.1.1.-KEGG:00640+3.1.1.-KEGG:00830+3.1.1.-
KEGG:00900+3.1.1.-KEGG:00940+3.1.1.-KEGG:00960+3.1.1.-KEGG:ath:AT3G50790
KO:K07019OMA:YLAGISMPfam:PF00561PhylomeDB:Q9SVL9
PIR:T08400PIRSF:PIRSF005211PROSITE:PS01133Proteomes:UP000006548
Reactome:R-ATH-1483191RefSeq:NP_190648.1scanprosite:PS01133STRING:3702.AT3G50790.1
SUPFAM:SSF53474TAIR:AT3G50790UniGene:At.43557UniProt:Q9SVL9
Coordinates (TAIR10) chr3:-:18880074..18881940
Molecular Weight (calculated) 45172.60 Da
IEP (calculated) 7.02
GRAVY (calculated) -0.20
Length 408 amino acids
Sequence (TAIR10)
(BLAST)
001: MARVAFATSS PPLISSVRTL RRHFSVFAAA NPEMSRPSHH SSLEVIGGGS DRFLPSLKDS LAKPYNAFPL IGFNRHVETI YASFFRSVPF VRLRRECLRT
101: KDNGSVALDW VAGEDRHFPP DSPILILLPG LTGGSQDSYV RHMLLRAQSK KWRCVVFNSR GCGDSPVTTP QFYSASFLGD IGEVIDHVVD KFPKANLYAA
201: GWSLGGNILV NYLGQESHNC PLTAAVSLCN PFDLVIADED FHKGFNNVYD KALSKSLRRI FSKHSLLFED IGGEFNIPLA ANAETVRDFD DGLTRVSFGF
301: KSVDEYYSKS SSSKAIKHVR IPLLCIQAAN DPIAPERGIP RDDIKANPNC VLIVTPRGGH LGWVAGEEAP NGAPWTDQVV MEFLQHVENR ETINGERSFE
401: DVHDQIQV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)