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AT3G49845.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
plasma membrane 0.978
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: root; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JSBAeggNOG:ENOG411143JEMBL:CP002686EnsemblPlants:AT3G49845
EnsemblPlants:AT3G49845.1entrez:6240705GeneID:6240705Gramene:AT3G49845.1
hmmpanther:PTHR31568hmmpanther:PTHR31568:SF3InParanoid:F4IZ80KEGG:ath:AT3G49845
OMA:PQEGYAQPaxDb:F4IZ80ProteinModelPortal:F4IZ80Proteomes:UP000006548
RefSeq:NP_001118805.1TAIR:AT3G49845UniGene:At.35564UniProt:F4IZ80
Coordinates (TAIR10) chr3:+:18487339..18487965
Molecular Weight (calculated) 13354.70 Da
IEP (calculated) 7.33
GRAVY (calculated) -1.03
Length 124 amino acids
Sequence (TAIR10)
(BLAST)
001: MSYQDPQHPV SAPPPQGYPP KEGYPPAGYP PPAGYPPPQY PQAGYPPAGY PPPQQGYGQG YPAQGYPPPQ YPQGHPPQYP YQGPPPPHYG QAPPKNKKDK
101: KDSGGFMEGC LAMLCCCVLL EACF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)