AT3G49210.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.526 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : O-acyltransferase (WSD1-like) family protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
O-acyltransferase (WSD1-like) family protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 16 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: O-acyltransferase, WSD1, C-terminal (InterPro:IPR009721), O-acyltransferase, WSD1, N-terminal (InterPro:IPR004255); BEST Arabidopsis thaliana protein match is: O-acyltransferase (WSD1-like) family protein (TAIR:AT3G49200.1); Has 1044 Blast hits to 1032 proteins in 166 species: Archae - 2; Bacteria - 797; Metazoa - 8; Fungi - 0; Plants - 224; Viruses - 0; Other Eukaryotes - 13 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:18238216..18241161 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 58532.00 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.80 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.26 | ||||||||||||||||||||||||||||||||||||
| Length | 518 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEIKTRRDTS ETSVRKDDEE EVEEEQPLSP AARVFHAPEF NCYVISVIGI KKKIDPDVII EGLKQTLIRH PRFSSKMVST SVGNKKRQTQ SWVRTNVVVT 101: DHVIVSDIQT QNIENGNADA FLETYVSNLT TVPLDISKPL WQLHLLDLKT SDAENVAVLK FHHSLGDGMS LMALVLACMR KTSNPDELPS LPNQNRSSSR 201: SSRLMAGSRG DSRFLWLVMV IWSAIMLVLN TVCDALEFIA TTMFLKDTET PIKGDFRFSK SKRMCLVHRT VSLDDIKLIK NTMKMTVNDV VLGVSQAGLS 301: QYLDRRYGEK KKKVGEDQDS KRKATDMPKR IRLRSALLVN LRPNTGIQDL ADMMAKGSTC RWGNWIGYIV FPFSIGLRDD PLQHLRRAKR IIDRKKNSLE 401: AALTFVAGKF ILKTFGVQVA AKIINRALSN TTMSFSNLIG PIEEISFYGH PITYMAPSVY GHPHALTMHF QSYMNQMTIS LTVDPTVISD PHRLLDDWEK 501: SLQSIKAAVQ ERDSRSLD |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)