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AT3G49110.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
ASURE: extracellular
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:16284776 (2006): extracellular region
  • PMID:31673584 (2019): extracellular region plant-type cell wall
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:30783145 (2019): extracellular region apoplast
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:28818374 (2017): extracellular region plant-type cell wall
  • PMID:28155257 (2017): extracellular region plant-type cell wall
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:24393051 (2015): extracellular region
  • PMID:15539469 (2004): plant-type vacuole
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : peroxidase CA
Curator
Summary (TAIR10)
Class III peroxidase Perx33. Expressed in roots. Located in the cell wall. Involved in cell elongation. Expression activated by light. May play a role in generating H2O2 during defense response.
Computational
Description (TAIR10)
peroxidase CA (PRXCA); FUNCTIONS IN: peroxidase activity; INVOLVED IN: oxygen and reactive oxygen species metabolic process, response to light stimulus, defense response to bacterium, defense response to fungus, unidimensional cell growth; LOCATED IN: vacuole, plant-type cell wall; EXPRESSED IN: stem, root; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant peroxidase (InterPro:IPR000823), Peroxidases heam-ligand binding site (InterPro:IPR019793), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016), Peroxidase, active site (InterPro:IPR019794); BEST Arabidopsis thaliana protein match is: peroxidase CB (TAIR:AT3G49120.1); Has 4322 Blast hits to 4294 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 31; Plants - 4239; Viruses - 0; Other Eukaryotes - 49 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G49110-MONOMERBioGrid:9390EC:1.11.1.7eggNOG:ENOG410JAWC
eggNOG:ENOG41119N5EMBL:AL132956EMBL:AL132967EMBL:AY049304
EMBL:AY052673EMBL:CP002686EMBL:M58380EnsemblPlants:AT3G49110
EnsemblPlants:AT3G49110.1entrez:824072GeneID:824072Genevisible:P24101
GO:GO:0004601GO:GO:0005576GO:GO:0005773GO:GO:0006952
GO:GO:0006979GO:GO:0009416GO:GO:0009505GO:GO:0009826
GO:GO:0020037GO:GO:0042742GO:GO:0042744GO:GO:0046872
GO:GO:0050832GO:GO:0052033GO:GO:0072593GO:GO:0098869
Gramene:AT3G49110.1hmmpanther:PTHR31388hmmpanther:PTHR31388:SF22HOGENOM:HOG000237557
InParanoid:P24101InterPro:IPR000823InterPro:IPR002016InterPro:IPR010255
InterPro:IPR019793InterPro:IPR019794KEGG:00940+1.11.1.7KEGG:ath:AT3G49110
KO:K00430OMA:EIRLQCNPaxDb:P24101PeroxiBase:199
Pfam:P24101Pfam:PF00141Pfscan:PS50873PhylomeDB:P24101
PIR:JU0457PRIDE:P24101PRINTS:PR00458PRINTS:PR00461
PRO:PR:P24101PROSITE:PS00435PROSITE:PS00436PROSITE:PS50873
ProteinModelPortal:P24101Proteomes:UP000006548RefSeq:NP_190480.1scanprosite:PS00435
scanprosite:PS00436SMR:P24101STRING:3702.AT3G49110.1SUPFAM:SSF48113
TAIR:AT3G49110tair10-symbols:ATPCAtair10-symbols:ATPRX33tair10-symbols:PRX33
tair10-symbols:PRXCATMHMM:TMhelixUniGene:At.23913UniGene:At.47588
UniProt:P24101
Coordinates (TAIR10) chr3:+:18200713..18202891
Molecular Weight (calculated) 38943.40 Da
IEP (calculated) 6.86
GRAVY (calculated) -0.07
Length 354 amino acids
Sequence (TAIR10)
(BLAST)
001: MQFSSSSITS FTWTVLITVG CLMLCASFSD AQLTPTFYDT SCPTVTNIVR DTIVNELRSD PRIAGSILRL HFHDCFVNGC DASILLDNTT SFRTEKDALG
101: NANSARGFPV IDRMKAAVER ACPRTVSCAD MLTIAAQQSV TLAGGPSWKV PLGRRDSLQA FLDLANANLP APFFTLPQLK ANFKNVGLDR PSDLVALSGA
201: HTFGKNQCRF IMDRLYNFSN TGLPDPTLNT TYLQTLRGQC PRNGNQSVLV DFDLRTPLVF DNKYYVNLKE QKGLIQSDQE LFSSPNATDT IPLVRAYADG
301: TQTFFNAFVE AMNRMGNITP TTGTQGQIRL NCRVVNSNSL LHDVVDIVDF VSSM
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)