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AT3G45770.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Polyketide synthase, enoylreductase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Polyketide synthase, enoylreductase family protein; FUNCTIONS IN: copper ion binding, zinc ion binding, ATP binding; INVOLVED IN: oxidation reduction, metabolic process; LOCATED IN: mitochondrion, chloroplast, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Polyketide synthase, enoylreductase (InterPro:IPR020843), NAD(P)-binding domain (InterPro:IPR016040), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: ARP protein (REF) (TAIR:AT1G49670.1); Has 24073 Blast hits to 23997 proteins in 2260 species: Archae - 304; Bacteria - 15447; Metazoa - 1396; Fungi - 2050; Plants - 679; Viruses - 0; Other Eukaryotes - 4197 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G45770-MONOMERBioCyc:ARA:GQT-1388-MONOMERBioGrid:9040EC:1.3.1.38
eggNOG:COG0604eggNOG:KOG0025EMBL:AL157735EMBL:AY062554
EMBL:AY086398EMBL:AY114655EMBL:CP002686EnsemblPlants:AT3G45770
EnsemblPlants:AT3G45770.1entrez:823720ExpressionAtlas:Q8LCU7Gene3D:3.40.50.720
Gene3D:3.90.180.10GeneID:823720Genevisible:Q8LCU7GO:GO:0005507
GO:GO:0005524GO:GO:0005634GO:GO:0005739GO:GO:0006633
GO:GO:0008270GO:GO:0009507GO:GO:0019166hmmpanther:PTHR11695
hmmpanther:PTHR11695:SF496HOGENOM:HOG000294683InParanoid:Q8LCU7InterPro:IPR002085
InterPro:IPR011032InterPro:IPR013149InterPro:IPR013154InterPro:IPR016040
InterPro:IPR020843KEGG:ath:AT3G45770KO:K07512MINT:MINT-8069555
OMA:FRGFWMTPANTHER:PTHR11695PaxDb:Q8LCU7Pfam:PF00107
Pfam:PF08240Pfam:Q8LCU7PhylomeDB:Q8LCU7PIR:T47517
PRIDE:Q8LCU7PRO:PR:Q8LCU7ProteinModelPortal:Q8LCU7Proteomes:UP000006548
RefSeq:NP_566881.1SMART:SM00829SMR:Q8LCU7STRING:3702.AT3G45770.1
SUPFAM:SSF50129SUPFAM:SSF51735TAIR:AT3G45770UniGene:At.3719
UniProt:Q8LCU7
Coordinates (TAIR10) chr3:-:16805753..16807774
Molecular Weight (calculated) 40825.40 Da
IEP (calculated) 7.21
GRAVY (calculated) -0.04
Length 375 amino acids
Sequence (TAIR10)
(BLAST)
001: MAALMESVVG RALKFSSTAN FRSIRRGETP TLCIKSFSTI MSPPSKAIVY EEHGSPDSVT RLVNLPPVEV KENDVCVKMI AAPINPSDIN RIEGVYPVRP
101: PVPAVGGYEG VGEVYAVGSN VNGFSPGDWV IPSPPSSGTW QTYVVKEESV WHKIDKECPM EYAATITVNP LTALRMLEDF VNLNSGDSVV QNGATSIVGQ
201: CVIQLARLRG ISTINLIRDR AGSDEAREQL KALGADEVFS ESQLNVKNVK SLLGNLPEPA LGFNCVGGNA ASLVLKYLRE GGTMVTYGGM SKKPITVSTT
301: SFIFKDLALR GFWLQSWLSM GKVKECREMI DYLLGLARDG KLKYETELVP FEEFPVALDK ALGKLGRQPK QVITF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)