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AT3G44970.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
endoplasmic reticulum 0.978
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Cytochrome P450 superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Cytochrome P450 superfamily protein; FUNCTIONS IN: electron carrier activity, monooxygenase activity, iron ion binding, oxygen binding, heme binding; LOCATED IN: endomembrane system; EXPRESSED IN: shoot apex, shoot, cotyledon, hypocotyl, leaf; CONTAINS InterPro DOMAIN/s: Cytochrome P450 (InterPro:IPR001128), Cytochrome P450, E-class, group IV (InterPro:IPR002403), Cytochrome P450, conserved site (InterPro:IPR017972); BEST Arabidopsis thaliana protein match is: cytochrome P450, family 708, subfamily A, polypeptide 2 (TAIR:AT5G48000.5); Has 31585 Blast hits to 31508 proteins in 1695 species: Archae - 52; Bacteria - 6275; Metazoa - 10768; Fungi - 5445; Plants - 7650; Viruses - 6; Other Eukaryotes - 1389 (source: NCBI BLink).
Protein Annotations
eggNOG:COG2124eggNOG:KOG0157EMBL:CP002686EnsemblPlants:AT3G44970
EnsemblPlants:AT3G44970.1entrez:823632Gene3D:1.10.630.10GeneID:823632
GO:GO:0004497GO:GO:0005506GO:GO:0016705GO:GO:0020037
Gramene:AT3G44970.1hmmpanther:PTHR24286hmmpanther:PTHR24286:SF37InParanoid:F4J4C0
InterPro:IPR001128InterPro:IPR002403InterPro:IPR017972iPTMnet:F4J4C0
KEGG:ath:AT3G44970PaxDb:F4J4C0Pfam:PF00067PRIDE:F4J4C0
PRINTS:PR00385PRINTS:PR00465PROSITE:PS00086ProteinModelPortal:F4J4C0
Proteomes:UP000006548Reactome:R-ATH-211916Reactome:R-ATH-5365859RefSeq:NP_190083.2
scanprosite:PS00086SMR:F4J4C0STRING:3702.AT3G44970.1SUPFAM:SSF48264
TAIR:AT3G44970UniGene:At.53744UniProt:F4J4C0
Coordinates (TAIR10) chr3:+:16432443..16434848
Molecular Weight (calculated) 54949.30 Da
IEP (calculated) 9.71
GRAVY (calculated) -0.17
Length 479 amino acids
Sequence (TAIR10)
(BLAST)
001: MNLFWNTGFC VIVLVVARVG HWWYQWSNPK SNGKLPPGSM GFPIIGETLD FFKPYGFYEI SPYLKKKMLR YGPLFRTNIL GVKTVVSTDK DVNMEILRQE
101: NKSFILSYPD GLMKPLGKDS LFLKIGNIHK HIKQITLHLL SSEGLKRKIL KDMDRVTREH LSSKAKTGRL DVKDAVSKLI IAHLTPKMMS NLKPQTQAKL
201: MGIFKAFTFD WFRTSYLISA GKGLYNTLWA CREGMREIKD IYTMRKTSEE KYDDFLNTAI EESEKAGELL NENAIITLIF TLSCVTQDTT SKAICLAVKF
301: LLENPKVLAE LKKEHEVILE SREDKEGGVT WEEYRHKMTF TNMVINESLR ITNLAPMLFR KAVKDVEIKG YTIPAGWIVM IIPSVVHFDP EIYENPFEFN
401: PWRWEGKELR AGSKTFMVFG TGLRQCAGAE FARLQISVFL HHLVTTYNFS LHQDCEVLRV PAAHLPNGIS INISKCPKK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)