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AT3G43670.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31673584 (2019): extracellular region plant-type cell wall
  • PMID:30783145 (2019): extracellular region apoplast
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:28865150 (2017): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Copper amine oxidase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Copper amine oxidase family protein; FUNCTIONS IN: primary amine oxidase activity, quinone binding, copper ion binding; INVOLVED IN: oxidation reduction, amine metabolic process; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Copper amine oxidase, N-terminal (InterPro:IPR016182), Copper amine oxidase, N2-terminal (InterPro:IPR015800), Copper amine oxidase, N2/N3-terminal (InterPro:IPR015801), Copper amine oxidase, N3-terminal (InterPro:IPR015802), Copper amine oxidase (InterPro:IPR000269), Copper amine oxidase, C-terminal (InterPro:IPR015798); BEST Arabidopsis thaliana protein match is: Copper amine oxidase family protein (TAIR:AT1G62810.1); Has 1555 Blast hits to 1551 proteins in 277 species: Archae - 14; Bacteria - 383; Metazoa - 247; Fungi - 452; Plants - 241; Viruses - 0; Other Eukaryotes - 218 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G43670-MONOMEREC:1.4.3.-eggNOG:COG3733eggNOG:KOG1186
EMBL:AL138638EMBL:AY095989EMBL:BT005817EMBL:CP002686
EnsemblPlants:AT3G43670EnsemblPlants:AT3G43670.1entrez:823469Gene3D:2.70.98.20
GeneID:823469GO:GO:0005507GO:GO:0008131GO:GO:0009308
GO:GO:0048038Gramene:AT3G43670.1hmmpanther:PTHR10638hmmpanther:PTHR10638:SF38
HOGENOM:HOG000250947InterPro:IPR000269InterPro:IPR015798InterPro:IPR015800
InterPro:IPR015802InterPro:IPR016182KEGG:00260+1.4.3.21KEGG:00350+1.4.3.21
KEGG:00360+1.4.3.21KEGG:00410+1.4.3.21KEGG:00950+1.4.3.21KEGG:00960+1.4.3.21
KEGG:ath:AT3G43670KO:K00276OMA:ICITPFAPANTHER:PTHR10638
Pfam:PF01179Pfam:PF02727Pfam:PF02728PhylomeDB:Q9M2B9
PIR:T47403PROSITE:PS01165Proteomes:UP000006548Reactome:R-ATH-211945
RefSeq:NP_189953.1scanprosite:PS01165SMR:Q9M2B9STRING:3702.AT3G43670.1
SUPFAM:SSF49998SUPFAM:SSF54416TAIR:AT3G43670TMHMM:TMhelix
UniGene:At.24887UniProt:Q9M2B9
Coordinates (TAIR10) chr3:+:15567144..15569734
Molecular Weight (calculated) 77537.00 Da
IEP (calculated) 5.91
GRAVY (calculated) -0.27
Length 687 amino acids
Sequence (TAIR10)
(BLAST)
001: MVELSFSQLL VLLLSLLFLF TTLASSSKTP RFKYSLEKPH HPLDPLTTPE IKRVQTILSG HDPGFGSGST IIHAMALDEP DKQRVIRWKK GDRLPPRRAE
101: ILAMSNGESH VLTVDLKSGR VVSDLVNPTF GYPILTMKDI IAVSQVPYKS VEFNRSIEAR GIPFSGLICI TPFAGWYGPD EEGRRVIKIQ CFSKQDTVNF
201: YMRPIEGLYL TVDMDKLEII KIVDNGPVPV PKSTGTEYRY GFLNETVYMD RVNPMSMEQP DGPSFQVEDG YLVKWANWKF HIKPDQRAGM IISQATVRDS
301: KTGEARSVMY KGFASELFVP NMDPGEGWYS KAYMDAGEFG LGPSSMPLVP LNDCPRNAYY IDGFFASPEG IPILQPNMIC LFERYAGDTS WRHSEILLPG
401: VDIRESRAKV TLVARMACSV GNYDYIFDWE FQMDGVIRVT VAASGMLMVK GTAYENVEDL GEKEDDSGPL ISENVIGVVH DHFISFHLDM DIDGSANNSF
501: VKVHLEKQRL PPGESRRKSY LKVKKYVAKT EKDAQIKMSL YDPYEFHLVN PNRLSRLGNP AGYKLVPGGN AASLLDHDDP PQMRGAFTNN QIWVTRYNRS
601: EQWAGGLLMY QSRGEDTLQV WSDRDRSIEN KDIVLWYTLG FHHVPCQEDF PVMPTIASSF ELKPVNFFES NPVLGISPFF EKDLPVC
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)