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AT3G23510.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.644
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Cyclopropane-fatty-acyl-phospholipid synthase
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Cyclopropane-fatty-acyl-phospholipid synthase; FUNCTIONS IN: cyclopropane-fatty-acyl-phospholipid synthase activity; INVOLVED IN: lipid biosynthetic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Amine oxidase (InterPro:IPR002937), Cyclopropane-fatty-acyl-phospholipid/mycolic acid synthase (InterPro:IPR003333), Adrenodoxin reductase (InterPro:IPR000759); BEST Arabidopsis thaliana protein match is: Cyclopropane-fatty-acyl-phospholipid synthase (TAIR:AT3G23530.1); Has 15002 Blast hits to 14978 proteins in 1959 species: Archae - 119; Bacteria - 7379; Metazoa - 131; Fungi - 498; Plants - 325; Viruses - 0; Other Eukaryotes - 6550 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G23510-MONOMEReggNOG:COG2230eggNOG:COG2907eggNOG:ENOG410IF2I
EMBL:AK117243EMBL:CP002686EnsemblPlants:AT3G23510EnsemblPlants:AT3G23510.1
entrez:821931Gene3D:3.40.50.150Gene3D:3.50.50.60GeneID:821931
GO:GO:0016491Gramene:AT3G23510.1hmmpanther:PTHR10108hmmpanther:PTHR10108:SF795
HOGENOM:HOG000030385InterPro:IPR002937InterPro:IPR023753InterPro:IPR029063
KEGG:ath:AT3G23510KO:K00574OMA:AETESCKPfam:PF01593
Pfam:PF02353PhylomeDB:Q8GZ28Proteomes:UP000006548RefSeq:NP_188993.2
SMR:Q8GZ28STRING:3702.AT3G23510.1SUPFAM:SSF51905SUPFAM:SSF53335
TAIR:AT3G23510UniGene:At.48699UniProt:Q8GZ28
Coordinates (TAIR10) chr3:+:8428071..8433159
Molecular Weight (calculated) 97886.10 Da
IEP (calculated) 6.43
GRAVY (calculated) -0.16
Length 867 amino acids
Sequence (TAIR10)
(BLAST)
001: MKVAVIGSGI SGLGSAYVLA NQGVKEVVLY EKEESLGGHA KTVRFDGVDL DLGFMVFNRV TYPNMIEFFE NLGVEMEVSD MSFAVSLDNG KGCEWGSRNG
101: VSGLFAQKKN VLNPYFWQMI REIVRFKEDV LNYIEKLEGN PDIDRKETLG EFLNTRGYSE LFQQAYLVPI CGSIWSCPSD GVLSFSAYSV LSFCCNHHLL
201: QIFGRPQWLT VAGRSQTYVA KVRAELERLG CKIRTSCDVK SVSTSENGCV TVTSGDGSEE VFDRCILAMH APDALRLLGE EVTFDESRVL GAFQYVYSDI
301: YLHHDIDLMP RNKAAWSAWN FLGSTEKKVC VTYWLNILQN LGENSEPFFV TLNPDETPKK ALLKWTTGHP VPSVAASIAS QELHQIQGKR NIWFCGAYQG
401: YGFHEDGLKA GMAAARGLLG KETALLNNPR HMVPSLTETG ARLFVTRFLG QFISTGSVTI LEEGGTMFTF GGKDSTCPLK SILKIHSPQF YWKVMTQADL
501: GLADAYINGD FSFVDKESGL LNLIMILIAN RDTKSNLTKK RGWWTPMFLT AGLASAKYFL KHVSRQNTLT QARRNISRHY DLSNELFGLF LDDTMTYSSA
601: VFKSDDEDLR TAQMRKISLL IDKARIEKDH EVLEIGCGWG TLAIEVVRRT GCKYTGITLS IEQLKYAEEK VKEAGLQDRI TFELRDYRQL SDAHKYDRII
701: SCEMLEAVGH EFMEMFFSRC EAALAEDGLM VLQFISTPEE RYNEYRLSSD FIKEYIFPGA CVPSLAKVTS AMSSSSRLCI EHVENIGIHY YQTLRLWRKN
801: FLERQKQIMA LGFDDKFVRT WEYYFDYCAA GFKTRTLGDY QLVFSRPGNV AAFADSYRGF PSAYCVS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)