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AT3G23490.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31186290 (2019): cytosol None
  • PMID:31023727 (2019): mitochondrion
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:27943495 (2017): mitochondrion
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:21166475 (2011): cytosol
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cyanase
Curator
Summary (TAIR10)
cyanase
Computational
Description (TAIR10)
cyanase (CYN); FUNCTIONS IN: hydro-lyase activity, DNA binding, cyanate hydratase activity; INVOLVED IN: cyanate metabolic process, metabolic process; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Lambda repressor-like, DNA-binding (InterPro:IPR010982), Cyanase (InterPro:IPR008076), Cyanate lyase, C-terminal (InterPro:IPR003712); Has 993 Blast hits to 992 proteins in 414 species: Archae - 3; Bacteria - 787; Metazoa - 7; Fungi - 73; Plants - 52; Viruses - 0; Other Eukaryotes - 71 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G23490-MONOMERBioCyc:MetaCyc:AT3G23490-MONOMERBioGrid:7262BRENDA:4.2.1.104
EC:4.2.1.104eggNOG:COG1513eggNOG:ENOG410IWK0EMBL:AB004568
EMBL:AB015748EMBL:AF410298EMBL:AP000374EMBL:AY093708
EMBL:CP002686EnsemblPlants:AT3G23490EnsemblPlants:AT3G23490.1entrez:821930
Gene3D:1.10.260.40Gene3D:3.30.1160.10GeneID:821930Genevisible:O22683
GO:GO:0003677GO:GO:0005829GO:GO:0008824GO:GO:0009440
GO:GO:0009651GO:GO:0042802Gramene:AT3G23490.1gramene_plant_reactome:1119586
gramene_plant_reactome:6876604HAMAP:MF_00535hmmpanther:PTHR34186hmmpanther:PTHR34186:SF1
HOGENOM:HOG000043436InParanoid:O22683InterPro:IPR003712InterPro:IPR008076
InterPro:IPR010982iPTMnet:O22683KEGG:ath:AT3G23490KO:K01725
OMA:PPMRSYDPaxDb:O22683Pfam:O22683Pfam:PF02560
PhylomeDB:O22683PIRSF:PIRSF001263PRIDE:O22683PRINTS:PR01693
PRO:PR:O22683ProteinModelPortal:O22683Proteomes:UP000006548RefSeq:NP_188991.1
SMART:SM01116SMR:O22683STRING:3702.AT3G23490.1SUPFAM:0036636
SUPFAM:SSF47413SUPFAM:SSF55234TAIR:AT3G23490tair10-symbols:CYN
TIGRfam:TIGR00673TIGRFAMs:TIGR00673UniGene:At.20785UniProt:O22683
Coordinates (TAIR10) chr3:-:8423238..8424415
Molecular Weight (calculated) 18593.30 Da
IEP (calculated) 5.30
GRAVY (calculated) -0.35
Length 168 amino acids
Sequence (TAIR10)
(BLAST)
001: MEAAKKQSVT NQLLAVKSAS GKTFSQLAAE TGLTNVYVAQ LLRRQAQLKP DTVPKLKEAL PALTDELIGD MMSPPWRSYD PNLIQEPTIY RLNEAVMHFG
101: ESIKEIINED FGDGIMSAID FYCSVDKIKG VDGNNRVVVT LDGKYLSHSE QRTENMVSRL NLKGGTSE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)