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AT5G14680.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
nucleus 0.665
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Adenine nucleotide alpha hydrolases-like superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT3G01520.1); Has 2663 Blast hits to 2654 proteins in 727 species: Archae - 164; Bacteria - 1702; Metazoa - 92; Fungi - 33; Plants - 646; Viruses - 0; Other Eukaryotes - 26 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IVHDeggNOG:ENOG4111M5QEMBL:AL163792EMBL:BT011776
EMBL:BT015743EMBL:CP002688EnsemblPlants:AT5G14680EnsemblPlants:AT5G14680.1
entrez:831320Gene3D:3.40.50.620GeneID:831320GO:GO:0006950
GO:GO:0016787Gramene:AT5G14680.1hmmpanther:PTHR31964hmmpanther:PTHR31964:SF49
HOGENOM:HOG000239396InterPro:IPR006015InterPro:IPR006016InterPro:IPR014729
KEGG:ath:AT5G14680OMA:YPHASISPfam:PF00582PhylomeDB:Q9LYJ2
PIR:T48641PRINTS:PR01438Proteomes:UP000006548RefSeq:NP_196972.1
SMR:Q9LYJ2STRING:3702.AT5G14680.1SUPFAM:SSF52402TAIR:AT5G14680
UniGene:At.31897UniProt:Q9LYJ2
Coordinates (TAIR10) chr5:-:4731620..4733025
Molecular Weight (calculated) 19795.70 Da
IEP (calculated) 6.78
GRAVY (calculated) -0.38
Length 175 amino acids
Sequence (TAIR10)
(BLAST)
001: MESEPTRVMV AVNESTLKGY PHASISSKKA FEWTLKKIVR SNTSGFKLLL LHVQVQDEDG FDDMDSIYAS PDDFRQMRER NKAKGLHLLE FFVKKCHDIG
101: VGCEAWIRKG DPTELICHEV RRVRPDFLVV GSRGLGPFQK VFVGTVSEFC VKHAECPVIT IKRTAEESPQ DPADD
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)