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AT3G21610.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.485
golgi 0.424
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Acid phosphatase/vanadium-dependent haloperoxidase-related protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Acid phosphatase/vanadium-dependent haloperoxidase-related protein; CONTAINS InterPro DOMAIN/s: Acid phosphatase/vanadium-dependent haloperoxidase related (InterPro:IPR003832); BEST Arabidopsis thaliana protein match is: Acid phosphatase/vanadium-dependent haloperoxidase-related protein (TAIR:AT1G67600.1); Has 1115 Blast hits to 1115 proteins in 408 species: Archae - 0; Bacteria - 729; Metazoa - 0; Fungi - 0; Plants - 228; Viruses - 0; Other Eukaryotes - 158 (source: NCBI BLink).
Protein Annotations
eggNOG:COG1963eggNOG:ENOG410IWDWEMBL:AY128368EMBL:BT000347
EMBL:CP002686EnsemblPlants:AT3G21610EnsemblPlants:AT3G21610.1entrez:821715
ExpressionAtlas:Q8L7M6GeneID:821715GO:GO:0004601GO:GO:0016021
Gramene:AT3G21610.1hmmpanther:PTHR31446hmmpanther:PTHR31446:SF6HOGENOM:HOG000067103
InterPro:IPR003832OMA:ACALAQFPfam:PF02681PhylomeDB:Q8L7M6
Proteomes:UP000006548RefSeq:NP_188798.2STRING:3702.AT3G21610.1TAIR:AT3G21610
TMHMM:TMhelixUniGene:At.38028UniProt:Q8L7M6
Coordinates (TAIR10) chr3:-:7609377..7610601
Molecular Weight (calculated) 18471.40 Da
IEP (calculated) 7.60
GRAVY (calculated) 0.33
Length 174 amino acids
Sequence (TAIR10)
(BLAST)
001: MDEVMTAADV GSLGGGNRAL YGSPPSHNLF PHNLPIFSAF LAFALAQFLK VFTNWYKEKR WDSKRMISSG GMPSSHSATV TALAVAIGFE EGAGAPAFAI
101: AVVLACVVMY DASGVRLHAG RQAELLNQIV CEFPPEHPLS TVRPLRELLG HTPIQVAAGG ILGCVVAYLM RSSS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)