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AT3G20830.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: hypocotyl, male gametophyte, root, pedicel, carpel; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), AGC-kinase, C-terminal (InterPro:IPR000961), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G51170.1); Has 85073 Blast hits to 71957 proteins in 2517 species: Archae - 46; Bacteria - 10831; Metazoa - 34711; Fungi - 11201; Plants - 11819; Viruses - 155; Other Eukaryotes - 16310 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G20830-MONOMERBioGrid:6963EC:2.7.11.1eggNOG:ENOG410XQ0C
eggNOG:KOG0610EMBL:AB025629EMBL:BT026453EMBL:CP002686
EnsemblPlants:AT3G20830EnsemblPlants:AT3G20830.1entrez:821631GeneID:821631
Genevisible:Q9LT38GO:GO:0004674GO:GO:0005524GO:GO:0005634
GO:GO:0005737GO:GO:0005886GO:GO:0016301GO:GO:0035556
Gramene:AT3G20830.1hmmpanther:PTHR24351hmmpanther:PTHR24351:SF107HOGENOM:HOG000233027
InParanoid:Q9LT38InterPro:IPR000719InterPro:IPR000961InterPro:IPR008271
InterPro:IPR011009InterPro:IPR017441KEGG:ath:AT3G20830OMA:WAVPYCS
PaxDb:Q9LT38Pfam:PF00069Pfam:Q9LT38Pfscan:PS50011
Pfscan:PS51285PhylomeDB:Q9LT38PRIDE:Q9LT38PRO:PR:Q9LT38
PROSITE:PS00107PROSITE:PS00108PROSITE:PS50011PROSITE:PS51285
ProteinModelPortal:Q9LT38Proteomes:UP000006548RefSeq:NP_188719.1scanprosite:PS00107
scanprosite:PS00108SMART:SM00220SMR:Q9LT38STRING:3702.AT3G20830.1
SUPFAM:SSF56112TAIR:AT3G20830UniGene:At.49615UniProt:Q9LT38
Coordinates (TAIR10) chr3:-:7285024..7286250
Molecular Weight (calculated) 45891.90 Da
IEP (calculated) 9.72
GRAVY (calculated) -0.39
Length 408 amino acids
Sequence (TAIR10)
(BLAST)
001: MEPSPSSPPS SPPEILDLDS IKALKILGKG ATGTVFLAHD VVSTSSSSSP FAVKLVPKSS ASSLRRARWE IEVLRRLSVD SNQNPFLPRL LASFESPEYF
101: AWAVPYCSGG DLNVLLHRQN DGVFSSSVIR FYVAEIVCAL EHLHTMGIAY RDLKPENILI QQSGHVTLTD FDLSRSLKKP LRPHFYQPDP ELIIDRKKSR
201: SFSRLISPTA EKNKTGLKKT RSARVNPINR RKTSFSSGER SNSFVGTDEY VSPEVIRGDG HDFAVDWWAL GVLTYEMMYG ETPFKGKSKK ETFRNVLMKE
301: PEFAGKPNDL TDLIRRLLVK DPNRRLGCHR GAAEIKELAF FAGVRWDLLT EVLRPPFIPL RDDGELTVGG FDIREHFEKL RTTPSSAPPS PLRSPPHVCR
401: KNDPFIEF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)