AT3G18170.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.609 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Glycosyltransferase family 61 protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Glycosyltransferase family 61 protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Glycosyltransferase AER61, uncharacterised (InterPro:IPR007657); BEST Arabidopsis thaliana protein match is: Glycosyltransferase family 61 protein (TAIR:AT3G18180.1); Has 763 Blast hits to 762 proteins in 161 species: Archae - 0; Bacteria - 43; Metazoa - 286; Fungi - 9; Plants - 396; Viruses - 0; Other Eukaryotes - 29 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:6228393..6229547 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 43797.70 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 9.73 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.23 | ||||||||||||||||||||||||||||
| Length | 384 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKPICTKLAR TEFCELNGDV RVHGKSATVS AAITFAFSGN STWHIRPYAR KGDTVAMKRV REWTVKLEQN ADQLENANFS RCVRNHSVPA MIFSLGGYSM 101: NNFHDFTDIV IPLYTTARRF NGEVQFLVTN KSPSWINKFK ELVRKLSNYE VIYIDEEDET HCFSSVTVGL TRHREYFKEL TIDPSNSEYS MSDFRSFLRD 201: TYSLRNDAVA TRQIRRRRPR ILILARGRSR AFVNTGEIAR AARQIGFKVV VAEANIGIAK FAQTVNSCDV MLGVHGAGLT NMVFLPENAV VIQVLPIGGF 301: EWLAKTDFEK PSEGMNLRYL EYKIAVEEST LVKKYGRDHE IVRDPSAVAK HGWEMFKSVY LVQQNVSIDI NRFKPVLVKA LELL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)