AT3G17770.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.574 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Dihydroxyacetone kinase | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Dihydroxyacetone kinase; FUNCTIONS IN: glycerone kinase activity, ATP binding; INVOLVED IN: glycerol metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Dak phosphatase (InterPro:IPR004007), Dihydroxyacetone kinase (InterPro:IPR012734), Dak kinase (InterPro:IPR004006); BEST Arabidopsis thaliana protein match is: Dihydroxyacetone kinase (TAIR:AT1G48430.1); Has 5081 Blast hits to 5076 proteins in 1119 species: Archae - 14; Bacteria - 4130; Metazoa - 96; Fungi - 207; Plants - 69; Viruses - 0; Other Eukaryotes - 565 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:6081973..6085957 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 61924.30 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.77 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.08 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 595 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDFAAKKFIN NPNDVVTEFI EGLVETYPGL QYLDGFPEVK VVLRADVSAA KYDKVAVISG GGSGHEPAHA GYVGEGMLTA AICGDVFASP PVDSILAGIR 101: AVTGTEGCLL IVKNYTGDRL NFGLAAEQAK SEGYKVETVI VGEDCALPPP RGIAGRRGLA GTVLVHKVAG AAAAAGLSLE KVAAEAKCAS EMVGTMGVAL 201: SVCTLPGQVT SDRLGAQKME LGLGIHGEPG AAVVDVEPVD VVVSHVLQQI LSPETNYVPI TRGNRVVLMV NGLGGTPLME LMIAAGKAVP KLQLEFGLAV 301: DRVYTGFFMT SLDMAGFSIS IMKADHSILD RLDAPTKAPN WPVGTDGNRP PAKIPVPVPP SRSIKSMESQ SRPLELSKEG QVLEAAIQAA ATVIISLKDS 401: LNEWDGKVGD GDCGSTMYRG ATAILEDMKN YYPLNDAAET VNEIGLSIKR AMGGTSGIIY HLLCKAAYAE LKANAQSEVT PKNWSEALKS SIASVSKYGG 501: ATAGYRTMLD ALIPASQVLE EKLSAGEDPI SAFILSGEAA TAGAESTIQM QAQAGRSSYV SAENLATVPD PGAMAAAGWY NAAARAVKEQ YEGSS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)