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AT3G15850.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : fatty acid desaturase 5
Curator
Summary (TAIR10)
Chloroplastic enzyme responsible for the synthesis of 16:1 fatty acids from galactolipids and sulpholipids. Uses ferredoxin as electron donor.
Computational
Description (TAIR10)
fatty acid desaturase 5 (FAD5); CONTAINS InterPro DOMAIN/s: Fatty acid desaturase, type 1, core (InterPro:IPR015876), Fatty acid desaturase, type 1 (InterPro:IPR005804); BEST Arabidopsis thaliana protein match is: Fatty acid desaturase family protein (TAIR:AT3G15870.1); Has 3424 Blast hits to 3424 proteins in 822 species: Archae - 0; Bacteria - 1534; Metazoa - 801; Fungi - 236; Plants - 106; Viruses - 4; Other Eukaryotes - 743 (source: NCBI BLink).
Protein Annotations
BioCyc:MetaCyc:AT3G15850-MONOMEREC:1.14.19.42eggNOG:COG1398eggNOG:KOG1600
EMBL:AB017071EMBL:AB113831EMBL:AY050838EMBL:AY086456
EMBL:AY734684EMBL:BT000957EMBL:CP002686EnsemblPlants:AT3G15850
EnsemblPlants:AT3G15850.1entrez:820828GeneID:820828Genevisible:Q949X0
GO:GO:0006636GO:GO:0009579GO:GO:0010205GO:GO:0016021
GO:GO:0016717GO:GO:0031408GO:GO:0031969Gramene:AT3G15850.1
hmmpanther:PTHR11351hmmpanther:PTHR11351:SF2HOGENOM:HOG000270353InParanoid:Q949X0
InterPro:IPR005804InterPro:IPR015876KEGG:ath:AT3G15850KO:K00507
OMA:QRRHYLKPaxDb:Q949X0Pfam:PF00487Pfam:Q949X0
PhylomeDB:Q949X0PRIDE:Q949X0PRINTS:PR00075PRO:PR:Q949X0
ProteinModelPortal:Q949X0Proteomes:UP000006548Reactome:R-ATH-75105RefSeq:NP_566529.1
SMR:Q949X0STRING:3702.AT3G15850.1TAIR:AT3G15850tair10-symbols:ADS3
tair10-symbols:FAD5tair10-symbols:FADBtair10-symbols:JB67TMHMM:TMhelix
UniGene:At.5631UniGene:At.66565UniPathway:UPA00382UniPathway:UPA00658
UniProt:Q949X0
Coordinates (TAIR10) chr3:+:5359087..5360998
Molecular Weight (calculated) 42582.30 Da
IEP (calculated) 9.58
GRAVY (calculated) -0.05
Length 371 amino acids
Sequence (TAIR10)
(BLAST)
001: MASLLTKPKP VFLCSPSLSP RTLNTATPSL NFTRISFTHH QKLAPFKPPS LVVAFSEKGL KRDVTTAAAA TEGDYRRIML SDVLVKKKEK VVWWEREWKA
101: MDFGAVAVVL SMHLLSLLAP FQFNWRAVSV AFGLYIVTGL LGITLSFHRN LSHKAFKLPK WLEYLFAYCG AQALQGNPID WVSTHRYHHQ FCDSDRDPHS
201: PLDGFWFSHM NWMFDTNTIT QRCGEPNNVG DLEKQPFYRF LRTTYILHPL ALAVALYAMG GFPFIVWGMG VRIVWVYHIT WLVNSACHVW GKQAWNTGDL
301: SKNNWWVAAL AFGEGWHNNH HAFEFSARHG LEWWQLDMTW YVVKFLQAIG LATDVKLPSE AQKQRMAFTS D
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)