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AT3G11930.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.804
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Adenine nucleotide alpha hydrolases-like superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Adenine nucleotide alpha hydrolases-like superfamily protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT3G58450.1); Has 5625 Blast hits to 5442 proteins in 1151 species: Archae - 389; Bacteria - 4083; Metazoa - 138; Fungi - 112; Plants - 752; Viruses - 0; Other Eukaryotes - 151 (source: NCBI BLink).
Protein Annotations
EMBL:CP002686EnsemblPlants:AT3G11930EnsemblPlants:AT3G11930.1entrez:820366
ExpressionAtlas:F4J8J7Gene3D:3.40.50.620GeneID:820366GO:GO:0006950
Gramene:AT3G11930.1hmmpanther:PTHR31964hmmpanther:PTHR31964:SF15InterPro:IPR006015
InterPro:IPR006016InterPro:IPR014729Pfam:PF00582PhylomeDB:F4J8J7
PRIDE:F4J8J7PRINTS:PR01438ProteinModelPortal:F4J8J7Proteomes:UP000006548
RefSeq:NP_566406.1SMR:F4J8J7SUPFAM:SSF52402TAIR:AT3G11930
UniGene:At.30291UniGene:At.5410UniGene:At.67700UniProt:F4J8J7
Coordinates (TAIR10) chr3:+:3776371..3777393
Molecular Weight (calculated) 21458.80 Da
IEP (calculated) 5.60
GRAVY (calculated) -0.01
Length 199 amino acids
Sequence (TAIR10)
(BLAST)
001: MAEEQAATAM ETSAVEKQPE TTTEAEAPSL TTKRMVVAID ESDSSFYALQ WVIDHFSNLL LTTAAAEAES GMLTVIHVQS PFNHFAAFPA GPGGATVYAS
101: SSMIESVKKA QQETSAALLS RALQMCRAKQ IRTETLVLEG EAKEMICEAV EKMHVDLLVV GSRGLGKIKR AFLGSVSDYC AHHANCPILI VKPPKEMTK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)