AT3G09970.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.996 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Calcineurin-like metallo-phosphoesterase superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Calcineurin-like metallo-phosphoesterase superfamily protein; FUNCTIONS IN: hydrolase activity, protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843); BEST Arabidopsis thaliana protein match is: Calcineurin-like metallo-phosphoesterase superfamily protein (TAIR:AT3G09960.1); Has 1009 Blast hits to 1009 proteins in 371 species: Archae - 12; Bacteria - 594; Metazoa - 24; Fungi - 11; Plants - 146; Viruses - 12; Other Eukaryotes - 210 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:3063813..3065337 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 34426.90 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.34 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.42 | ||||||||||||||||||||||||||||||||
| Length | 309 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAQKPRTVIC VGDIHGYISK LNNLWLNLQS AIDPSDFSSA LVIFLGDYCD RGPETRKVID FLISLPEKHP DQTHVFLAGN HDFAFSGFLG LLPRPSDGSD 101: LKDTWKEYSK SEETEGWYTG EGFEDMHLQG RRWAGKIKAT FNSVKGMAYK GSIYDAGSTF ESYGVPHGSS DLMKAVPESH KKFLTNMVWV HEEDDVCIET 201: EEGLKHCKLI AVHAGLEKGN NVEEQLKLLR AKDTSISKIQ HLSGRKNVWD IPQELDDKHT VVVSGHHGKL HIDGMRLIID EGGGFPDKPV AAIVLPSKKI 301: IRDTDNLSS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)