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AT3G08590.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 1.000
ASURE: cytosol
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31186290 (2019): cytosol None
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:30447334 (2019): plasma membrane
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:27122571 (2016): mitochondrion
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:24361574 (2014): plastid plastid stroma
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:22550958 (2012): plastid
  • PMID:22522809 (2012): cytosol cytosolic ribosomes
  • PMID:22215637 (2012): plasma membrane
  • PMID:21533090 (2011): extracellular region plant-type cell wall
  • PMID:21433285 (2011): plasma membrane
  • PMID:21166475 (2011): cytosol
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; FUNCTIONS IN: manganese ion binding, phosphoglycerate mutase activity, 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity, catalytic activity, metal ion binding; INVOLVED IN: response to cadmium ion; LOCATED IN: cytosol, apoplast; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Alkaline phosphatase-like, alpha/beta/alpha (InterPro:IPR017849), Metalloenzyme (InterPro:IPR006124), BPG-independent PGAM, N-terminal (InterPro:IPR011258), Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (InterPro:IPR005995), Alkaline-phosphatase-like, core domain (InterPro:IPR017850); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent (TAIR:AT1G09780.1); Has 4794 Blast hits to 4787 proteins in 1681 species: Archae - 54; Bacteria - 3006; Metazoa - 34; Fungi - 85; Plants - 379; Viruses - 0; Other Eukaryotes - 1236 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0696eggNOG:KOG4513EMBL:AK316907EnsemblPlants:AT3G08590
EnsemblPlants:AT3G08590.1EnsemblPlants:AT3G08590.2entrez:820006ExpressionAtlas:B9DFU6
Gene3D:3.40.1450.10Gene3D:3.40.720.10GeneID:820006GO:GO:0004619
GO:GO:0005737GO:GO:0006007GO:GO:0030145Gramene:AT3G08590.1
Gramene:AT3G08590.2gramene_pathway:5.4.2.1gramene_pathway:GLYCOLYSISgramene_pathway:PWY-1042
gramene_pathway:PWY-5723gramene_pathway:PWYQT-4428hmmpanther:PTHR31637hmmpanther:PTHR31637:SF3
InterPro:IPR005995InterPro:IPR006124InterPro:IPR011258InterPro:IPR017849
InterPro:IPR017850iPTMnet:B9DFU6KEGG:00010+5.4.2.12KEGG:00260+5.4.2.12
KEGG:00680+5.4.2.12KEGG:ath:AT3G08590KO:K15633OMA:MVGHTAV
PaxDb:B9DFU6Pfam:PF01676Pfam:PF06415Pfam:Q9M9K1
PhylomeDB:B9DFU6PIRSF:PIRSF001492PRIDE:B9DFU6ProteinModelPortal:B9DFU6
RefSeq:NP_187471.1RefSeq:NP_850542.1SMR:B9DFU6STRING:3702.AT3G08590.1
SUPFAM:0037135SUPFAM:SSF53649SUPFAM:SSF64158TAIR:AT3G08590
TIGRfam:TIGR01307TIGRFAMs:TIGR01307UniGene:At.68440unipathway:UPA00109
UniProt:B9DFU6UniProt:Q9M9K1
Coordinates (TAIR10) chr3:-:2608683..2611237
Molecular Weight (calculated) 60767.20 Da
IEP (calculated) 5.63
GRAVY (calculated) -0.26
Length 560 amino acids
Sequence (TAIR10)
(BLAST)
001: MGSSGDVNWK LADHPKLPKG KTIGLIVLDG WGESDPDQYN CIHKAPTPAM DSLKDGKPDT WRLIKAHGTA VGLPSEDDMG NSEVGHNALG AGRIYAQGAK
101: LVDLALASGK IYEDEGFKYI SQSFEKGTVH LIGLLSDGGV HSRLDQVQLL LKGFAERGAK RIRVHILTDG RDVLDGSSVG FVETLEADLA ALRAKGVDAQ
201: VASGGGRMYV TMDRYENDWS VVKRGWDAQV LGEAPHKFKS ALEAVKTLRA EPGANDQYLP SFVIVDDNGK AVGPIVDGDA VVTFNFRADR MVMHAKALEY
301: KDFDKFDRVR VPDIRYAGML QYDGELKLPS RYLVSPPLID RTSGEYLAHN GVRTFACSET VKFGHVTFFW NGNRSGYFNE KLEEYVEIPS DSGISFNVQP
401: KMKALEIAEK ARDAILSGKF DQVRVNLPNG DMVGHTGDIE ATVVACEAAD RAVRTILDAI EQVGGIYVVT ADHGNAEDMV KRDKSGKPAL DKEGNLQILT
501: SHTLKPVPIA IGGPGLSAGV RFRQDIETPG LANVAATVMN LHGFVAPSDY ETSLIEVVEK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)