AT3G06450.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : HCO3- transporter family | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
HCO3- transporter family; FUNCTIONS IN: anion exchanger activity; INVOLVED IN: anion transport; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bicarbonate transporter, eukaryotic (InterPro:IPR003020), Bicarbonate transporter, C-terminal (InterPro:IPR011531); BEST Arabidopsis thaliana protein match is: HCO3- transporter family (TAIR:AT3G62270.1); Has 2674 Blast hits to 1402 proteins in 195 species: Archae - 0; Bacteria - 4; Metazoa - 2029; Fungi - 304; Plants - 228; Viruses - 2; Other Eukaryotes - 107 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:1976085..1979303 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 80772.70 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.83 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.22 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 732 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDEAESFVPF QGIKKDVKGR LNCYKQDWIS GLRAGFRILA PTTYIFFASA IPVITFGEQL ERDTDGKITA VQTLVSTALC GVIHSIIGGQ PLLILGVAEP 101: TVIMYTFMFN FAKSRTDLGS NLFLAWTGWV CLWTGLLLFL LAVLGACTFI NRFTRLAGEL FGILIAMLFM QEAIRGIVDE FGVPGRTNPR SAEFQPAWVF 201: ANGMFGLVLS SGLLYTGLKS RKARSWRFGA EWLRGFIADY GVPVMVVVWT CISYIPWKSV PQGIPRRLVS PNPWSPGAYQ NWTVIKEMVD VPVLYILLAV 301: VPASMIAVLY YFDHSVASQL AQQEDFNLRK PPAYHYDLFL LGFLTILCGL IGIPPSNGVI PQSPMHTKSL ATLNHQLLRN KLVAAARKCI RNNATIGEVY 401: GSMEEAYQQM QSPLIHQEPS RIQGLKQSHI QKASNADALV DETVFDIETE VENILPVEVK EQRVSNFLQA MMVAGCVAAM PLIKRIPSSV LWGYFAYMAI 501: ESLPGNQFWE RIVLLFTAPS RRFKVLEDNH AVFIETVPFK TMAMFTLFQT AYLLVCFGIT WVPVAGVLFP LMIMFLVPVR QYVLPNFFKG AHLQDLDAAE 601: YEEAPAILSF NLKPEGEVSR ATSFADSGEV MDGMFTRSRG EIRKVSSLKL GGGGSGSTVG SPAGGGVELM RRVVSFQNPR VSEKVYIRSL SDFRGGGEIS 701: PRSSAGRAPF SPRSATGGGG GEQRLSNLGK SV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)