AT3G05750.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G26910.1); Has 2317 Blast hits to 1467 proteins in 247 species: Archae - 4; Bacteria - 750; Metazoa - 557; Fungi - 182; Plants - 180; Viruses - 0; Other Eukaryotes - 644 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:1704677..1707546 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 89758.30 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 7.78 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.85 | ||||||||||||||||||||||||||||
| Length | 801 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVEMEAVERK RSRGGFLNMF DWPGKSRKKL FSSSSSSSKL SEGSKQEKQN AQNPSKSWPS LIEGDEIGKN STYNPRSDSS CSTSTPTSDD GQGSKAPSVV 101: ARLMGLESIP VPNALEPRRN PDFDPYFLRS SRKASTWDAY ENLGYVNLRS DYDGISWDHL DSRMNKECNR PIDRFQTETL PPRSAKPIPV THNRLLSPIR 201: SPGFVQSRNP ASVMEEASRM IEPSPRVVAK TRFSSSDSSS SLPMKIRDLK EKLEASQKGQ SPQISNGTCN NKCFRGKQDE KRTTLPLKTQ ERNNLLGESR 301: FGGSKGKVKP PSVSAHAKAN TIHKRDSSML SNGYRDQKKK VETKNRIVKS GLKESSASTR KTVDKPNNQK QNQFAETSVS NQRGRKVMKK VNKVLVENGT 401: TTKKPGFTAT SAKKSTSSSL SRKKNLSRSK KPANGVQEAG VNSDKRIKKG EKVIKCNITV DGGLKTGDDD RKKDMDVISF TFSSPIKGLS SDSQYFLKKN 501: DQDAESALCF NKIDSDSLNF LLEKKLRELT SKMESSCSSL TQEEESSGSI TKDWVNGTRS LPSDDQDNGL SESESDSDYS SSFYKKKIFQ AEDDEEVNSF 601: STAENLQISC STSFSSSRND YHHNIEETEL SESVALSEAE EGHDWELEYI TEIIASGQLM IKEFSLGMAT DILPLSLFDE TEGKRDARGK IERKTLFDLV 701: NQWLTLKCEQ MFMGTCKGVL GKQDIFLERR EILADQVLKE AQGLKKMREM MMDELVDNDM SSCEGKWLDY MRETYEEGIE IEEEIVSELV DDLINDLIMC 801: C |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)