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AT3G05170.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.943
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Phosphoglycerate mutase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Phosphoglycerate mutase family protein; FUNCTIONS IN: catalytic activity; INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078), Phosphoglycerate/bisphosphoglycerate mutase, active site (InterPro:IPR001345); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT1G08940.1); Has 1056 Blast hits to 1046 proteins in 414 species: Archae - 2; Bacteria - 582; Metazoa - 32; Fungi - 206; Plants - 86; Viruses - 0; Other Eukaryotes - 148 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IHHUeggNOG:ENOG4111HP2EMBL:AC009177EMBL:AK229691
EMBL:CP002686EnsemblPlants:AT3G05170EnsemblPlants:AT3G05170.1entrez:819681
Gene3D:3.40.50.1240GeneID:819681Genevisible:Q9MAA2GO:GO:0003824
GO:GO:0005975Gramene:AT3G05170.1hmmpanther:PTHR23029hmmpanther:PTHR23029:SF46
HOGENOM:HOG000221683InParanoid:Q9MAA2InterPro:IPR001345InterPro:IPR013078
InterPro:IPR029033KEGG:ath:AT3G05170OMA:HINPSHEPaxDb:Q9MAA2
Pfam:PF00300Pfam:Q9MAA2PhylomeDB:Q9MAA2PRIDE:Q9MAA2
PRO:PR:Q9MAA2PROSITE:PS00175ProteinModelPortal:Q9MAA2Proteomes:UP000006548
RefSeq:NP_187168.1scanprosite:PS00175SMART:SM00855STRING:3702.AT3G05170.1
SUPFAM:SSF53254TAIR:AT3G05170UniGene:At.18376UniProt:Q9MAA2
Coordinates (TAIR10) chr3:+:1466738..1468219
Molecular Weight (calculated) 36882.00 Da
IEP (calculated) 5.12
GRAVY (calculated) -0.79
Length 316 amino acids
Sequence (TAIR10)
(BLAST)
001: MSPDNKLLPK RIILVRHGES EGNLDTAAYT TTPDHKIQLT DSGLLQAQEA GARLHALISS NPSSPEWRVY FYVSPYDRTR STLREIGRSF SRRRVIGVRE
101: ECRIREQDFG NFQVKERMRA TKKVRERFGR FFYRFPEGES AADVFDRVSS FLESLWRDID MNRLHINPSH ELNFVIVSHG LTSRVFLMKW FKWSVEQFEG
201: LNNPGNSEIR VMELGQGGDY SLAIHHTEEE LATWGLSPEM IADQKWRANA HKGEWKEDCK WYFGDFFDHM ADSDKECETE ATEDREEEEE EEGKRVNLLT
301: SSEYSNEPEL YNGQCC
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)