AT3G02065.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.637 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : P-loop containing nucleoside triphosphate hydrolases superfamily protein | ||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: helicase activity, ATP-dependent helicase activity, ATP binding, nucleic acid binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: DNA/RNA helicase, DEAD/DEAH box type, N-terminal (InterPro:IPR011545), DEAD-like helicase, N-terminal (InterPro:IPR014001), DNA/RNA helicase, C-terminal (InterPro:IPR001650), Helicase, superfamily 1/2, ATP-binding domain (InterPro:IPR014021); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G42520.1); Has 40669 Blast hits to 40162 proteins in 3004 species: Archae - 589; Bacteria - 20482; Metazoa - 5880; Fungi - 4585; Plants - 2539; Viruses - 12; Other Eukaryotes - 6582 (source: NCBI BLink). | ||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:359628..360734 | ||||||||||||
| Molecular Weight (calculated) | 40129.40 Da | ||||||||||||
| IEP (calculated) | 10.06 | ||||||||||||
| GRAVY (calculated) | 0.04 | ||||||||||||
| Length | 368 amino acids | ||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MQAIPAALTG KSLLASADTG SGKTASFLVP IISRCTTYHS EHPSDQRRNP LAMVLAPTRE LCVQVEDQAK MLGKGLPFKT ALVVGGDPMS GQLYRIQQGV 101: ELIIGTPGRV VDLLSKHTIE LDNIMTFVLD EVDCMLQRGF RDQVMQIFQA LSQPQVLLFS ATISREVEKV GGSLAKEIIL VSIGNPNKPN KAVNQLAIWV 201: DAKQKKQKLF DILRSQNHFK PPAVVYVSSR VGADLLANAI TVVTGVKALS IHGEKPMKER RDVMGSFLGG EVPVLVSTGV LGRGVDLLVV RQVIVFDMPS 301: TIKEYIHVIG RASRMGEKGT AIVFVNEDDR NLFPDLVAAL KSSGAAIPKE LINLTSREMH NKKRRVGY |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)